Shewanella waksmanii sp. nov., isolated from a sipuncula (Phascolosoma japonicum)

Int J Syst Evol Microbiol. 2003 Sep;53(Pt 5):1471-1477. doi: 10.1099/ijs.0.02630-0.

Abstract

Two marine bacterial strains, KMM 3823(T) and KMM 3836, isolated from a sipuncula (Phascolosoma japonicum), a common inhabitant of Troitsa Bay in the Gulf of Peter the Great (Sea of Japan), were studied. Comparative 16S rRNA gene sequence-based phylogenetic analysis placed these bacteria into a separate branch of the 'Gammaproteobacteria' within members of the genus SHEWANELLA: KMM 3823(T) showed the highest similarity (96.6 %) with Shewanella fidelis. The DNA G+C contents of the two strains studied were 43.0 mol%. The level of DNA homology between these two strains was conspecific (93 %), indicating that they represent a single genospecies. These organisms were greenish-brown, Gram-negative, polarly flagellated, facultatively anaerobic, mesophilic (temperature range 4-30 degrees C), neutrophilic, haemolytic and were able to degrade elastin, gelatin and DNA. They were susceptible to ampicillin, carbenicillin, gentamicin and kanamycin. The predominant fatty acids were characteristic for shewanellas: 13 : 0-i, 15 : 0-i and 16 : 1(n-7); up to 6.7 % of eicosapentaenoic fatty acid, 20 : 5(n-3), was produced during growth at 28 degrees C. Phylogenetic evidence, confirmed by DNA hybridization and phenotypic characteristics revealed that the two bacteria studied constitute a new species, Shewanella waksmanii sp. nov., the type strain of which is KMM 3823(T) (=CIP 107701(T)=ATCC BAA-643(T)).

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Base Composition
  • DNA, Bacterial / chemistry
  • DNA, Bacterial / genetics
  • DNA, Ribosomal / genetics
  • Fatty Acids / analysis
  • Invertebrates / microbiology*
  • Marine Biology
  • Molecular Sequence Data
  • Phenotype
  • Phylogeny
  • RNA, Bacterial / genetics
  • RNA, Ribosomal, 16S / genetics
  • Shewanella / classification
  • Shewanella / genetics
  • Shewanella / isolation & purification*
  • Shewanella / metabolism

Substances

  • DNA, Bacterial
  • DNA, Ribosomal
  • Fatty Acids
  • RNA, Bacterial
  • RNA, Ribosomal, 16S

Associated data

  • GENBANK/AY170366