Changes in phosphorus concentration and form along 110 km of the River Swale in Northern England were examined over a 2-year period during 1998-2000. This study aimed to use these data to identify the importance of within-channel storage on phosphorus dynamics and to determine the changes in longitudinal transport of phosphorus along a river continuum. The catchment was divided into three contrasting zones: the upland, dominated by sheep farming; a transitional zone, and an intensively-farmed lowland, impacted by sewage inputs. Samples, taken at the downstream extent of each zone at approximately 2-day intervals, were analysed for total phosphorus (TP), total dissolved phosphorus (TDP) and soluble reactive phosphorus (SRP), all of which increased in concentration downstream. SRP concentrations were highest in summer and during low flows, although 92% of phosphorus was exported between autumn and spring. The TDP in the upper and transitional zones consisted of both soluble reactive and un-reactive phosphorus, but in marked contrast was almost entirely in soluble reactive form in the lowland. The majority (85%) of phosphorus exported from the catchment was generated within the lowland, due to sewage inputs and losses from intensive agricultural land. It was predominantly particulate-bound, due to interactions of dissolved phosphorus with suspended sediment. The upland contributed less than 5% to the TP annual budget. Intensive river water monitoring highlighted that the lowland dominated phosphorus export during the rising stage of storms (indicating a rapid mobilisation of fine phosphorus-rich sediment), whereas the transitional zone became dominant on the falling stage (due to greater diffuse phosphorus input).