Close relationship between G8-serotype bovine and human rotaviruses isolated in Nigeria

J Clin Microbiol. 2003 Aug;41(8):3945-50. doi: 10.1128/JCM.41.8.3945-3950.2003.

Abstract

A bovine rotavirus, NGRBg8, isolated from the feces of a calf with diarrhea in Nigeria was characterized by reverse transcription-PCR, nucleotide sequence analysis, and Northern blot hybridization. The nucleotide sequence of the VP7 gene of the strain was most closely related to that of a Nigerian human G8-serotype strain, HMG035 (99.9%). The NSP1 gene of strain NGRBg8 is highly related (99.4%) to that of a Thai G8 bovine strain, A5-10. Northern blot hybridization revealed a high overall genomic relatedness of bovine strain NGRBg8 with human strain HMG035; all 11 RNA segments hybridized to each other. Thus, the results show the close relationship between G8 bovine and human rotaviruses in Nigeria.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Base Sequence
  • Blotting, Northern
  • Cattle
  • Humans
  • Molecular Sequence Data
  • Nigeria
  • Phylogeny
  • Polymerase Chain Reaction / methods
  • RNA, Viral / genetics
  • RNA, Viral / isolation & purification
  • Reverse Transcriptase Polymerase Chain Reaction
  • Rotavirus / classification*
  • Rotavirus / genetics
  • Rotavirus / isolation & purification
  • Serotyping / methods

Substances

  • RNA, Viral

Associated data

  • GENBANK/AB096861
  • GENBANK/AB096862
  • GENBANK/AF361439