Detection of enteric viruses in municipal sewage sludge by a combination of the enzymatic virus elution method and RT-PCR

Water Res. 2003 Aug;37(14):3490-8. doi: 10.1016/S0043-1354(03)00208-2.

Abstract

Pathogenic enteric viruses can be retained in municipal sewage sludge as has been reported by many researchers. Although the RT-PCR technique has been extensively employed for the virus detection from various environmental samples, the application of RT-PCR to the detection of viruses in sewage sludge has the difficulty because of inhibitory substances to the gene amplification. However, a combination of the enzymatic virus elution (EVE) method with RT-PCR made it possible to effectively detect viruses in sewage sludge. The enzymatic breakdown of sludge flocs in the EVE method enhanced the virus elution from poliovirus 1 (PV1)-inoculated sewage sludge, and the detection of PV1 was performed by RT-PCR without any inhibitions. On the contrary, the application of RT-PCR to the viral assay in the US EPA method using the 10% beef extract solution was not practical because of inhibitions to the viral gene amplification. The combination of the EVE method using lysozyme (polysaccharide-degrading enzyme), papain (protease), and chymotrypsin (protease) with RT-PCR resulted in a virus recovery efficiency of 31%, but a synergistic effect of these enzymes on the virus recovery efficiency was not observed. The EVE method using lysozyme or papain could be a promising procedure for the virus elution from sewage sludge in detecting these viruses with RT-PCR.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Biological Assay
  • Chymotrypsin / pharmacology
  • DNA, Viral / analysis*
  • Enterovirus / genetics*
  • Enterovirus / isolation & purification
  • Enterovirus / pathogenicity*
  • Environmental Monitoring
  • Muramidase / pharmacology
  • Papain / pharmacology
  • Reverse Transcriptase Polymerase Chain Reaction
  • Sewage / virology*
  • Waste Disposal, Fluid

Substances

  • DNA, Viral
  • Sewage
  • Muramidase
  • Chymotrypsin
  • Papain