Efficient macrocyclization of U-turn preorganized peptidomimetics: the role of intramolecular H-bond and solvophobic effects

J Am Chem Soc. 2003 Jun 4;125(22):6677-86. doi: 10.1021/ja0284759.

Abstract

Simple peptidomimetic molecules derived from amino acids were reacted with meta- and para-bis(bromomethyl)benzene in acetonitrile to very efficiently yield macrocyclic structures. The cyclization reaction does not require high dilution techniques and seems to be insensitive to the size of the formed macrocycle. The analysis of data obtained by (1)H NMR, single-crystal X-ray diffraction, fluorescence measurements, and molecular mechanics indicate that folded conformations can preorganize the system for an efficient cyclization. The role played by intramolecular hydrogen-bonding and solvophobic effects in the presence of folded conformations is analyzed.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amides / chemical synthesis*
  • Amides / chemistry
  • Amino Acids / chemistry*
  • Biomimetic Materials / chemistry*
  • Computer Simulation
  • Cyclization
  • Hydrogen Bonding
  • Magnetic Resonance Spectroscopy
  • Models, Molecular
  • Peptides / chemistry*
  • Protein Folding
  • Solvents
  • Spectrometry, Fluorescence
  • Toluene / analogs & derivatives
  • X-Ray Diffraction

Substances

  • Amides
  • Amino Acids
  • Peptides
  • Solvents
  • Toluene