[Mutational analysis of the conserved motif of the Arda anti-restriction protein encoded by self-transmissible IncI plasmid ColIb-p9]

Mol Biol (Mosk). 2002 Nov-Dec;36(6):1062-7.
[Article in Russian]

Abstract

A study was made of the functional role of the ArdA antirestriction motif (130-LLADVPETVALYFD-143) conserved among all known Ard (alleviation of restriction of DNA) proteins, which are encoded by self-transmissible plasmids and specifically inhibit type I restriction-modification systems. Conserved residues of the motif were individually changed, and the resulting mutants tested for in vivo activity. Hydrophobic L130, L131, and V138 were substituted with negatively charged E; negatively charged D133, E136, and D143 substituted with hydrophobic V; and D127, D150, and D154 neighboring the antirestriction motif substituted with V. Four substitutions (L130E, L131E, V138E, and D143V) substantially (25-1000 times) reduced the ArdA activity. The other substitutions within or beyond the motif had no appreciable effect. Substitutions L130A and L131A each reduced the ArdA activity 10- to 20-fold, indicating that high hydrophobicity of L130 and L131 is important for the ArdA function. Thus, the antirestriction role of ArdA is indeed due to its conserved motif.

MeSH terms

  • Alanine
  • Amino Acid Sequence
  • Amino Acid Substitution
  • Bacterial Proteins / genetics*
  • Bacterial Proteins / metabolism*
  • Base Sequence
  • Conserved Sequence
  • DNA Mutational Analysis
  • DNA Restriction-Modification Enzymes / metabolism
  • DNA-Binding Proteins*
  • Escherichia coli / genetics
  • Escherichia coli Proteins*
  • Molecular Sequence Data
  • Plasmids / genetics*
  • Repressor Proteins*

Substances

  • ArdA protein, E coli
  • Bacterial Proteins
  • DNA Restriction-Modification Enzymes
  • DNA-Binding Proteins
  • Escherichia coli Proteins
  • Repressor Proteins
  • Alanine