Peptide ligands for the fibronectin type II modules of matrix metalloproteinase 2 (MMP-2)

J Biol Chem. 2003 Apr 4;278(14):12241-6. doi: 10.1074/jbc.M210116200. Epub 2002 Dec 16.

Abstract

The interaction of matrix metalloproteinase 2 (MMP-2) with gelatin is mediated by three repeats homologous to fibronectin type II (FN2) modules, which are inserted in the catalytic domain in proximity of the active site. We screened a random 15-mer phage display library to identify peptides that interact with the FN2 modules of MMP-2. Interestingly, the selected peptides are not gelatin-like and do not share a common, obvious sequence motif. However, they contain a high proportion of aromatic residues. The interactions of two peptides, WHWRH0RIPLQLAAGR and THSHQWRHHQFPAPT, with constructs comprising the in-tandem first and second and second and third FN2 modules of MMP-2 (Col-12 and Col-23, respectively) were characterized by NMR. Both peptides interact with Col-12 and Col-23 with apparent association constants in the mm(-1) range. Peptide binding results in perturbation of signals from residues located in the gelatin-binding pocket and flexible parts of the molecule. Although the former finding suggests that the gelatin-binding site is involved in the contact, the interpretation of the latter is less straightforward and may well reflect both the direct and indirect effects of the interaction.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Amino Acid Sequence
  • Binding Sites
  • Collagen / metabolism
  • Fibronectins / metabolism*
  • Humans
  • Ligands
  • Matrix Metalloproteinase 2 / chemistry*
  • Matrix Metalloproteinase 2 / metabolism*
  • Molecular Sequence Data
  • Peptide Fragments / metabolism
  • Peptide Library
  • Protein Structure, Tertiary

Substances

  • Fibronectins
  • Ligands
  • Peptide Fragments
  • Peptide Library
  • Collagen
  • Matrix Metalloproteinase 2