Equilibrium of formation of the 6-carbanion of UMP, a potential intermediate in the action of OMP decarboxylase

J Am Chem Soc. 2002 Nov 27;124(47):13986-7. doi: 10.1021/ja021073g.

Abstract

There has been some speculation that the C-6 position in UMP may be unusually acidic, stabilizing a carbanion that is generated at this position during OMP decarboxylation. On the basis of the rate of OH- catalyzed deuterium exchange at elevated temperatures we estimate that the pKa value for ionization at C-6 of dimethyl uracil is 34 +/- 2 in water. The same method yields a value of 37 +/- 2 for ionization at C-2 of thiophene in good agreement with the value determined by polarographic methods. The barrier to proton release (46 kcal/mol) is even higher than that for CO2 release from orotic acid derivatives.

Publication types

  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Deuterium / chemistry
  • Hot Temperature
  • Kinetics
  • Orotidine-5'-Phosphate Decarboxylase / chemistry
  • Orotidine-5'-Phosphate Decarboxylase / metabolism*
  • Uracil / analogs & derivatives*
  • Uracil / chemistry
  • Uracil / metabolism
  • Uridine Monophosphate / chemistry
  • Uridine Monophosphate / metabolism*

Substances

  • Uracil
  • 1,3-dimethyluracil
  • Deuterium
  • Uridine Monophosphate
  • Orotidine-5'-Phosphate Decarboxylase