Structural analysis of a gene cluster encoding DFR-like proteins from rice chromosome 4

Sheng Wu Hua Xue Yu Sheng Wu Wu Li Xue Bao (Shanghai). 2002 Nov;34(6):685-9.

Abstract

Sequencing analysis of the 323 kb contig of rice chromosome 4 identified a gene cluster encoding 7 dihydroflavonol-4-reductase (DFR)-like proteins within a 56 kb region. The 7 DFR-like genes were found to be arranged in a tandem array, and all of them comprised 6 exons and 5 introns. Analysis of the predicted amino acid sequences demonstrated that these 7 proteins shared strong similarities with DFR and other enzymes of the phenylpropanoid biosynthesis pathway. RT-PCR revealed the expression pattern of the 7 genes was different in various rice tissues. The structural and functional features of these 7 DFR-like genes and their evolutionary implications are discussed.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Alcohol Oxidoreductases / genetics*
  • Chromosome Mapping
  • Chromosomes, Plant / genetics*
  • DNA, Plant / chemistry
  • DNA, Plant / genetics
  • Exons
  • Gene Expression Regulation, Enzymologic
  • Gene Expression Regulation, Plant
  • Genes, Plant / genetics*
  • Introns
  • Multigene Family / genetics*
  • Phylogeny
  • RNA, Plant / genetics
  • RNA, Plant / metabolism
  • Sequence Analysis, DNA

Substances

  • DNA, Plant
  • RNA, Plant
  • Alcohol Oxidoreductases
  • dihydroflavanol 4-reductase