CaGE: cardiac gene expression knowledgebase

Michael Bober; Kevin Wiehe; Christina Yung; Tugba Onal Suzek; Matthew Lin; William Baumgartner Jr; Raimond Winslow

doi:10.1093/bioinformatics/18.7.1013

CaGE: cardiac gene expression knowledgebase

Bioinformatics. 2002 Jul;18(7):1013-4. doi: 10.1093/bioinformatics/18.7.1013.

Authors

Michael Bober¹, Kevin Wiehe, Christina Yung, Tugba Onal Suzek, Matthew Lin, William Baumgartner Jr, Raimond Winslow

Affiliation

¹ Whitaker Biomedical Engineering Institute, Center for Computational Medicine & Biology, The Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA. mbbober@pol.net

PMID: 12117801
DOI: 10.1093/bioinformatics/18.7.1013

Abstract

CaGE is a Cardiac Gene Expression knowledgebase we have developed to facilitate the analysis of genes important to human cardiac function. CaGE integrates the functionality of the LocusLink database with data from several human cardiac expression libraries, phenotypic data from OMIM and data from large-scale microarray gene expression studies to create a knowledgebase of gene expression in human cardiac tissue. The knowledgebase is fully searchable via the web using several intuitive query interfaces. Results can be displayed in several concise easy to navigate formats.

Availability: CaGE is located at http://www.cage.wbmei.jhu.edu

Publication types

Research Support, Non-U.S. Gov't
Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

Artificial Intelligence*
Database Management Systems*
Databases, Genetic*
Gene Expression Profiling / methods*
Gene Expression*
Humans
Information Storage and Retrieval / methods
Myocardium / metabolism*
National Library of Medicine (U.S.)
United States