Deletion analysis of the C-terminal region of the alpha-amylase of Bacillus sp. strain TS-23

Arch Microbiol. 2002 Aug;178(2):115-23. doi: 10.1007/s00203-002-0431-5. Epub 2002 May 8.

Abstract

The alpha-amylase from Bacillus sp. strain TS-23 is a secreted starch hydrolase with a domain organization similar to that of other microbial alpha-amylases and an additional functionally unknown domain (amino acids 517-613) in the C-terminal region. By sequence comparison, we found that this latter domain contained a sequence motif typical for raw-starch binding. To investigate the functional role of the C-terminal region of the alpha-amylase of Bacillus sp. strain TS-23, four His(6)-tagged mutants with extensive deletions in this region were constructed and expressed in Escherichia coli. SDS-PAGE and activity staining analyses showed that the N- and C-terminally truncated alpha-amylases had molecular masses of approximately 65, 58, 54, and 49 kDa. Progressive loss of raw-starch-binding activity occurred upon removal of C-terminal amino acid residues, indicating the requirement for the entire region in formation of a functional starch-binding domain. Up to 98 amino acids from the C-terminal end of the alpha-amylase could be deleted without significant effect on the raw-starch hydrolytic activity or thermal stability. Furthermore, the active mutants hydrolyzed raw corn starch to produce maltopentaose as the main product, suggesting that the raw-starch hydrolytic activity of the Bacillus sp. strain TS-23 alpha-amylase is functional and independent from the starch-binding domain.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adsorption
  • Amino Acid Sequence
  • Bacillus / enzymology*
  • Bacillus / genetics*
  • Base Sequence
  • Binding Sites / genetics
  • Catalytic Domain / genetics
  • DNA, Bacterial / genetics
  • Enzyme Stability
  • Escherichia coli / genetics
  • Hydrolysis
  • Molecular Sequence Data
  • Recombinant Proteins / genetics
  • Recombinant Proteins / metabolism
  • Sequence Deletion
  • Sequence Homology, Amino Acid
  • Starch / metabolism
  • alpha-Amylases / genetics*
  • alpha-Amylases / metabolism

Substances

  • DNA, Bacterial
  • Recombinant Proteins
  • Starch
  • alpha-Amylases