Detection of a very rapid first phase in complex formation of DnaK and peptide substrate

FEBS Lett. 2002 Jun 5;520(1-3):25-9. doi: 10.1016/s0014-5793(02)02752-7.

Abstract

Complex formation of the Hsp70 chaperone DnaK with the fluorescence-labeled peptide ALLLSAPRR shows a very rapid first phase that has as yet not been observed with other peptides. This first phase is completed within the dead time (1-2 ms) of the stopped-flow instrument and corresponds to two thirds of the total increase in fluorescence. It occurs both in the presence and in the absence of ATP and is followed by a fast, a slow and a very slow step. These binding kinetics that are vastly different from those observed with other peptides might indicate the existence of a second substrate-binding site of DnaK.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adenosine Triphosphate / pharmacology
  • Amino Acid Sequence
  • Escherichia coli Proteins*
  • Fluorescence
  • HSP70 Heat-Shock Proteins / chemistry*
  • HSP70 Heat-Shock Proteins / metabolism
  • Kinetics
  • Oligopeptides / chemistry*
  • Oligopeptides / metabolism
  • Protein Binding / drug effects
  • Spectrometry, Fluorescence
  • Time Factors

Substances

  • Escherichia coli Proteins
  • HSP70 Heat-Shock Proteins
  • Oligopeptides
  • Adenosine Triphosphate
  • dnaK protein, E coli