Crystallization and preliminary X-ray crystallographic analysis of SEDL

Acta Crystallogr D Biol Crystallogr. 2002 Mar;58(Pt 3):564-6. doi: 10.1107/s0907444902001403. Epub 2002 Feb 21.

Abstract

SEDL (known also as sedlin) is a 140 amino-acid protein with a putative role in endoplasmic reticulum-to-Golgi transport. Several missense mutations and deletion mutations in the SEDL gene, which result in protein truncation by frame shift, are responsible for spondyloepiphyseal dysplasia tarda, a progressive skeletal disorder. The protein is identical to MIP-2A, which was shown to interact physically with c-myc promotor-binding protein 1 (MBP-1) and relieve the regulatory role of MBP-1 as a general transcription repressor. In order to gain insights into the function of SEDL by structural analysis, the protein was overexpressed and crystallized as a first step. SEDL was overexpressed in Escherichia coli and crystallized using the hanging-drop vapour-diffusion method at 298 K. The crystals belong to the orthorhombic space group C222(1), with unit-cell parameters a = 46.69, b = 101.30, c = 66.15 A. The unit cell is likely to contain one molecule of SEDL, with a crystal volume per protein mass (V(M)) of 2.36 A(3)Da(-1) and a solvent content of about 47.9% by volume. A native data set to 2.8 A resolution was obtained from a flash-cooled crystal using synchrotron radiation.

Publication types

  • Comparative Study
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Carrier Proteins / chemistry*
  • Crystallization
  • Crystallography, X-Ray
  • Humans
  • Membrane Transport Proteins*
  • Mice
  • Protein Conformation
  • Recombinant Proteins / chemistry
  • Species Specificity
  • Transcription Factors

Substances

  • Carrier Proteins
  • Membrane Transport Proteins
  • Recombinant Proteins
  • TRAPPC2 protein, human
  • Transcription Factors