The coupling of subcritical water separation with flame ionization detection (FID) in the split mode has been investigated in this study. In order to keep the FID system stable during subcritical water separation, a Tee union was connected between the separation column and the FID system to split the water flow. The ratio of the water flow to the FID system over the flow-rate to a waste bottle varied depending on the dimension of capillary tubings and the total water flow-rate used. Separations of several carbohydrates, carboxylic acids, and amino acids were performed on commercially available columns using a laboratory-made subcritical water chromatography-FID system. The FID system was very stable in this split mode even at total flow-rate as high as 1.24 ml/min. The linear dynamic range was up to three orders of magnitude and the limit of detection (LOD) ranged from 38 to 111 ng (306-925 ng/microl injected) with split ratios of approximately 1:10 to approximately 1:17 (FID/waste bottle) for several analytes studied. However, the LOD can be significantly lowered by adjusting the dimensions of the restrictors to allow a higher percentage of the total flow to the FID system.