Cloning and functional expression of ASIC-beta2, a splice variant of ASIC-beta

Neuroreport. 2001 Sep 17;12(13):2865-9. doi: 10.1097/00001756-200109170-00022.

Abstract

We have isolated a cDNA encoding a splice variant of ASIC (acid-sensing ion channel)-beta from the rat trigeminal ganglion. This clone, designated ASIC-beta2, showed a 342 base deletion just after the first transmembrane domain in ASIC-beta. RT-PCR experiments revealed that ASIC-beta2 was expressed exclusively in the trigeminal ganglion and dorsal root ganglion. In situ hybridization showed that ASIC-beta2 mRNA was concentrated in both small diameter and large diameter neurons and co-localized with ASIC-beta mRNA within single sensory neurons in the trigeminal ganglion. When expressed in Xenopus oocytes, ASIC-beta2 was inactive by itself. However, it associated with ASIC-beta to form heteromers, which display lower affinity for protons than ASIC-beta alone.

MeSH terms

  • Acid Sensing Ion Channels
  • Alternative Splicing / physiology*
  • Amino Acid Sequence / physiology
  • Animals
  • Base Sequence / physiology
  • Cell Size / genetics
  • Cloning, Molecular
  • DNA, Complementary / isolation & purification*
  • Ganglia, Sensory / cytology
  • Ganglia, Sensory / metabolism*
  • Gene Expression / physiology*
  • Membrane Proteins*
  • Molecular Sequence Data
  • Nerve Tissue Proteins*
  • Oocytes / metabolism
  • Pain / metabolism*
  • Pain / physiopathology
  • Protein Isoforms / genetics
  • RNA, Messenger / metabolism
  • Rats
  • Rats, Wistar
  • Sodium Channels / genetics*
  • Trigeminal Ganglion / cytology
  • Trigeminal Ganglion / metabolism*
  • Xenopus laevis

Substances

  • ASIC3 protein, human
  • Acid Sensing Ion Channels
  • DNA, Complementary
  • Membrane Proteins
  • Nerve Tissue Proteins
  • Protein Isoforms
  • RNA, Messenger
  • Sodium Channels

Associated data

  • GENBANK/AB049451
  • GENBANK/AJ006519