Development of a real-time RT-PCR assay for plasma membrane calcium ATPase isoform 1 (PMCA1) mRNA levels in a human breast epithelial cell line

J Pharmacol Toxicol Methods. 2000 Nov-Dec;44(3):513-7. doi: 10.1016/s1056-8719(01)00112-5.

Abstract

The plasma membrane Ca(2+) pump is a key regulator of cytosolic free Ca(2+). Recent studies have demonstrated the dynamic expression of the plasma membrane Ca(2+) pump in a variety of cell types. Furthermore, alterations in plasma membrane calcium pump activity have now been implicated in human disease. In this study, the development of a technique to quantitatively assess mRNA expression of the human plasma membrane Ca(2+) ATPase (PMCA1) isoform of the plasma membrane Ca(2+) pump, using a real-time reverse transcriptase-polymerase chain reaction (real-time RT-PCR) assay in a human breast epithelial cell line (MCF-7) is described. The sequences of the PMCA1 primers and probe for real-time RT-PCR are presented. The results also indicate that PMCA1 mRNA can be normalized to both 18S ribosomal RNA (18S rRNA) and human glyceraldehyde-3-phosphate dehydrogenase (hGAPDH) in MCF-7 cells. Real-time RT-PCR will be most useful in assessing PMCA1 mRNA expression in cases where only low amounts of RNA are available and/or when numerous samples must be assessed simultaneously.

Publication types

  • Evaluation Study
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Breast Neoplasms / enzymology*
  • Breast Neoplasms / genetics
  • Calcium-Transporting ATPases / genetics*
  • Calcium-Transporting ATPases / metabolism
  • Cation Transport Proteins
  • DNA Primers / chemistry
  • DNA Probes / chemistry
  • DNA, Neoplasm / analysis
  • Female
  • Humans
  • Plasma Membrane Calcium-Transporting ATPases
  • RNA, Messenger / metabolism*
  • Reverse Transcriptase Polymerase Chain Reaction*
  • Tumor Cells, Cultured

Substances

  • ATP2B1 protein, human
  • Cation Transport Proteins
  • DNA Primers
  • DNA Probes
  • DNA, Neoplasm
  • RNA, Messenger
  • Plasma Membrane Calcium-Transporting ATPases
  • Calcium-Transporting ATPases