Stereochemistry of family 52 glycosyl hydrolases: a beta-xylosidase from Bacillus stearothermophilus T-6 is a retaining enzyme

FEBS Lett. 2001 Apr 20;495(1-2):39-43. doi: 10.1016/s0014-5793(01)02360-2.

Abstract

A beta-xylosidase from Bacillus stearothermophilus T-6 assigned to the uncharacterized glycosyl hydrolase family 52 was cloned, overexpressed in Escherichia coli and purified. The enzyme showed maximum activity at 65 degrees C and pH 5.6-6.3. The stereochemistry of the hydrolysis of p-nitrophenyl beta-D-xylopyranoside was followed by 1H-nuclear magnetic resonance. Time dependent spectrum analysis showed that the configuration of the anomeric carbon was retained, indicating that a retaining mechanism prevails in family 52 glycosyl hydrolases. Sequence alignment and site-directed mutagenesis enabled the identification of functionally important amino acid residues of which Glu337 and Glu413 are likely to be the two key catalytic residues involved in enzyme catalysis.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Catalysis
  • Cloning, Molecular
  • Consensus Sequence
  • Escherichia coli / genetics
  • Geobacillus stearothermophilus / enzymology*
  • Glycosides / metabolism
  • Hydrogen-Ion Concentration
  • Hydrolysis
  • Magnetic Resonance Spectroscopy
  • Molecular Conformation
  • Molecular Sequence Data
  • Multigene Family / genetics*
  • Mutagenesis, Site-Directed
  • Sequence Analysis, DNA
  • Sequence Homology, Amino Acid
  • Xylosidases / chemistry
  • Xylosidases / genetics
  • Xylosidases / metabolism

Substances

  • Glycosides
  • 4-nitrophenyl beta-D-xyloside
  • Xylosidases
  • exo-1,4-beta-D-xylosidase

Associated data

  • SWISSPROT/AAC98122