Proteinase-polymerase precursor as the active form of feline calicivirus RNA-dependent RNA polymerase

J Virol. 2001 Feb;75(3):1211-9. doi: 10.1128/JVI.75.3.1211-1219.2001.

Abstract

The objective of this study was to identify the active form of the feline calicivirus (FCV) RNA-dependent RNA polymerase (RdRP). Multiple active forms of the FCV RdRP were identified. The most active enzyme was the full-length proteinase-polymerase (Pro-Pol) precursor protein, corresponding to amino acids 1072 to 1763 of the FCV polyprotein encoded by open reading frame 1 of the genome. Deletion of 163 amino acids from the amino terminus of Pro-Pol (the Val-1235 amino terminus) caused a threefold reduction in polymerase activity. Deletion of an additional one (the Thr-1236 amino terminus) or two (the Ala-1237 amino terminus) amino acids produced derivatives that were 7- and 175-fold, respectively, less active than Pro-Pol. FCV proteinase-dependent processing of Pro-Pol in the interdomain region preceding Val-1235 was not observed in the presence of a catalytically active proteinase; however, processing within the polymerase domain was observed. Inactivation of proteinase activity by changing the catalytic cysteine-1193 to glycine permitted the production and purification of intact Pro-Pol. Biochemical analysis of Pro-Pol showed that this enzyme has properties expected of a replicative polymerase, suggesting that Pro-Pol is an active form of the FCV RdRP.

Publication types

  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Amino Acid Sequence
  • Base Sequence
  • Calicivirus, Feline / enzymology*
  • Endopeptidases / chemistry
  • Endopeptidases / isolation & purification
  • Endopeptidases / metabolism*
  • Enzyme Precursors / chemistry
  • Enzyme Precursors / isolation & purification
  • Enzyme Precursors / metabolism*
  • Manganese / pharmacology
  • Molecular Sequence Data
  • RNA, Viral / biosynthesis
  • RNA-Dependent RNA Polymerase / metabolism*

Substances

  • Enzyme Precursors
  • RNA, Viral
  • Manganese
  • RNA-Dependent RNA Polymerase
  • Endopeptidases