Atomic force microscopy analysis of intermediates in cobalt hexammine-induced DNA condensation

J Biomol Struct Dyn. 2000 Aug;18(1):1-9. doi: 10.1080/07391102.2000.10506644.

Abstract

The packaging pathway of cobalt hexammine-induced DNA condensation on the surface of mica was examined by varying the concentration of Co(NH3)6(3+) in a dilute DNA solution and visualizing the condensates by atomic force microscopy (AFM). Images reveal that cobalt hexammine-induced DNA condensation on mica involves well-defined structures. At 30 microM Co(NH3)6(3+), prolate ellipsoid condensates composed of relatively shorter rods with linkages between them are formed. At 80 microM Co(NH3)6(3+), the condensed features include toroids with average diameter of approximately 240 nm as well as U-shaped and rod-like condensates with nodular appearances. The results imply that the condensates, whether toroids, U-shaped or rod-like structures have similar intermediate state which includes relatively shorter rod-like segments. The average size of the condensed toroids after incubated at room temperature for 5 h (approximately 240 nm) is much larger than that incubated for 0.5 h (approximately 100 nm). The results indicate that the condensation of DNA by Co(NH3)6(3+) is a kinetic-controlled process.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adsorption
  • Aluminum Silicates
  • Animals
  • Cattle
  • Cobalt / pharmacology*
  • DNA / chemistry*
  • DNA / drug effects*
  • DNA / ultrastructure
  • In Vitro Techniques
  • Microscopy, Atomic Force
  • Nucleic Acid Conformation / drug effects
  • Solutions

Substances

  • Aluminum Silicates
  • Solutions
  • hexaamminecobalt(II)
  • Cobalt
  • DNA
  • mica