A 1-Mb PAC contig spanning the common eliminated region 1 (CER1) in microcell hybrid-derived SCID tumors

Genomics. 1999 Dec 1;62(2):147-55. doi: 10.1006/geno.1999.5952.

Abstract

We have developed an elimination test to identify chromosomal regions that contain tumor inhibitory genes. Monochromosomal human/mouse microcell hybrids are generated and passaged through SCID mice. Derived tumors are then analyzed for deletions on the transgenomic chromosome. Using this strategy, we have previously identified a 1.6-cM common eliminated region 1 (CER1) on human 3p21. 3. We now report that CER1 contains 14 markers that are deleted in 19 SCID-derived tumors. A 1-Mb PAC contig that spans CER1 was assembled. Five chemokine receptor genes (CCR1, CCR3, CCR2, CCR5, and CCR6) were localized in CER1 in a 225-kb cluster. The lactotransferrin gene (LTF, or lactoferrin, LF), which reportedly has tumor inhibitory activity, also maps to CER1. Our results create a basis for characterization and further functional testing of genes within CER1.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Bacteriophage P1 / genetics*
  • Chromosomes, Human, Pair 3 / genetics
  • Contig Mapping* / methods
  • Fibrosarcoma / genetics*
  • Genes
  • Genetic Markers
  • Humans
  • Hybrid Cells
  • In Situ Hybridization, Fluorescence
  • Mice
  • Mice, SCID / genetics*
  • Molecular Sequence Data

Substances

  • Genetic Markers

Associated data

  • GENBANK/AJ132411