Preparation and properties of novel gramicidin S analogs possessing a tri-, tetra- or pentamethylene bridge between ornithine side chains

J Pept Res. 1999 Jun;53(6):611-7. doi: 10.1034/j.1399-3011.1999.00054.x.

Abstract

Gramicidin S (GS) analogs in which the Ndelta atoms of the two Orn side chains are linked by an oligomethylene bridge [-(CH2)n-; n=3-5] were prepared via the bis(p-nitrobenzenesulfonyl) derivative [Orn(NBS)2,2']GS. For comparison the nonbridged secondary amino group-containing analog [Orn(Me)2,2']GS was also prepared. 1H NMR and CD spectral analysis indicated that these analogs adopt the same beta-sheet conformation as GS. The antimicrobial activities of these analogs were very similar, but were slightly dependent on the bridge chain length, the trimethylene-bridged analog being the most potent.

MeSH terms

  • Anti-Bacterial Agents / chemical synthesis
  • Anti-Bacterial Agents / chemistry*
  • Anti-Bacterial Agents / pharmacology*
  • Bacillus subtilis / drug effects
  • Circular Dichroism
  • Drug Evaluation, Preclinical
  • Escherichia coli / drug effects
  • Gramicidin / analogs & derivatives*
  • Gramicidin / chemistry*
  • Hydrocarbons
  • Magnetic Resonance Spectroscopy
  • Methane / analogs & derivatives
  • Methane / chemistry
  • Microbial Sensitivity Tests
  • Ornithine / chemistry
  • Protein Conformation
  • Staphylococcus aureus / drug effects
  • Structure-Activity Relationship

Substances

  • Anti-Bacterial Agents
  • Hydrocarbons
  • Gramicidin
  • carbene
  • Ornithine
  • Methane