The genes rubA and rubB for alkane degradation in Acinetobacter sp. strain ADP1 are in an operon with estB, encoding an esterase, and oxyR

J Bacteriol. 1999 Jul;181(14):4292-8. doi: 10.1128/JB.181.14.4292-4298.1999.

Abstract

Alkanes are oxidized in Acinetobacter sp. strain ADP1 by a three-component alkane monooxygenase, composed of alkane hydroxylase, rubredoxin, and rubredoxin reductase. rubA and rubB encode rubredoxin and a NAD(P)H-dependent rubredoxin reductase. We demonstrate here that single base pair substitutions in rubA or rubB lead to defects in alkane degradation, showing that both genes are essential for alkane utilization. Differences in the degradation capacity for hexadecane and dodecane in these mutants are discussed. Two genes, estB and oxyR, are located downstream of rubB, but are not necessary for alkane degradation. estB encodes a functional esterase. oxyR encodes a LysR-type transcriptional regulator, conferring resistance to hydrogen peroxide. rubA, rubB, estB, and oxyR constitute an operon, which is constitutively transcribed from a sigma70 promoter, and an estB-oxyR containing message is also transcribed from an internal promoter.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Acinetobacter / enzymology
  • Acinetobacter / genetics*
  • Acinetobacter / growth & development
  • Alkanes / metabolism*
  • Amino Acid Sequence
  • Base Sequence
  • Biodegradation, Environmental
  • DNA, Bacterial / analysis
  • DNA-Binding Proteins*
  • Esterases / genetics
  • Esterases / metabolism
  • Gene Expression Regulation, Bacterial
  • Hydrogen Peroxide / pharmacology
  • Molecular Sequence Data
  • NADH, NADPH Oxidoreductases / genetics*
  • NADH, NADPH Oxidoreductases / metabolism
  • Operon*
  • Repressor Proteins / genetics
  • Repressor Proteins / metabolism
  • Rubredoxins / genetics*
  • Rubredoxins / metabolism
  • Transcription Factors / genetics
  • Transcription Factors / metabolism

Substances

  • Alkanes
  • DNA, Bacterial
  • DNA-Binding Proteins
  • Repressor Proteins
  • Rubredoxins
  • Transcription Factors
  • Hydrogen Peroxide
  • rubredoxin-NAD+ reductase
  • NADH, NADPH Oxidoreductases
  • Esterases

Associated data

  • GENBANK/X88895
  • GENBANK/Z46863