Mutant analysis of Prevotella sp. plaA-lacZ fusion protein expression in Escherichia coli: support for an essential role of the stem-loop

Can J Microbiol. 1999 Feb;45(2):153-61.

Abstract

This study investigated the involvement of RNA folding in the synthesis of a fusion protein with beta-galactosidase activity. The coding gap region of the Prevotella loescheii adhesin gene plaA was fused in-frame with the Escherichia coli lacZ gene on plasmid pSK105. N-Terminal sequencing of the expressed plaA-lacZ protein indicated that it resulted from translational initiation at a fortuitous ribosomal-binding site within the plaA sequence at nt 570. Specific mutations were introduced in the stem-loop region that precedes the gap sequence. Analysis of stem-loop mutants, together with the introduction of compensatory mutations that restored activity, supports a requirement for stem-loop formation within the plaA sequence preceding the translational initiation site. A mutation reducing the predicted size of the loop, but preserving the stem structure, inactivated fusion protein synthesis. A suppressor mutation predicted to restore the size of the loop restored efficient fusion protein synthesis. In addition, the sequence preceding the translational start site of the plaA-lacZ fusion has several similarities to sequences that function as translational enhancers in prokaryotes. These include a stem-loop structure, an A-U rich region preceding the initiation codon, and a region of homology to 16S rRNA.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Adhesins, Bacterial / genetics*
  • Amino Acid Sequence
  • Base Sequence
  • Escherichia coli / metabolism
  • Galactosides
  • Genes, Bacterial
  • Lac Operon / genetics
  • Lectins / genetics*
  • Molecular Sequence Data
  • Mutagenesis, Site-Directed
  • Nucleic Acid Conformation
  • Prevotella / genetics
  • Prevotella / metabolism*
  • Protein Folding*
  • RNA, Bacterial / chemistry*
  • RNA, Messenger / chemistry*
  • Recombinant Fusion Proteins / biosynthesis
  • Recombinant Fusion Proteins / genetics*

Substances

  • Adhesins, Bacterial
  • Galactosides
  • Lectins
  • RNA, Bacterial
  • RNA, Messenger
  • Recombinant Fusion Proteins
  • beta-galactoside
  • plaA protein, Prevotella loescheii