Voltage-gated sodium channel genes hscp and hDSC1 of Heliothis virescens F. genomic organization

Insect Mol Biol. 1999 May;8(2):161-70. doi: 10.1046/j.1365-2583.1999.820161.x.

Abstract

We report the genomic sequence of hscp, a sodium channel alpha subunit gene for Heliothis virescens. A 32-kb genomic clone and six independent RT-PCR products covering almost the entire coding region of the gene, contained thirty-one deduced exons with a translation of 1695 residues. Overall amino acid similarity to the para locus of Drosophila melanogaster was 86%. The transcription of the gene was complex. Alternate splicing was evident for five optional exons and a pair of mutually exclusive exons. A number of alternatively spliced mRNA revealed a deduced translation product that included only the first homology domain. We also report the first partial sequence for hDSC1, a presumed orthologous of the DSC1 sodium channel alpha subunit gene of D. melanogaster.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Alternative Splicing
  • Amino Acid Sequence
  • Animals
  • Base Sequence
  • DNA, Complementary
  • Genes, Insect*
  • Humans
  • Insect Proteins / genetics*
  • Ion Channel Gating*
  • Molecular Sequence Data
  • Moths / genetics*
  • RNA, Messenger
  • Sequence Homology, Amino Acid
  • Sodium Channels / genetics*

Substances

  • DNA, Complementary
  • DSC1 protein, Heliothis virescens
  • Insect Proteins
  • RNA, Messenger
  • Sodium Channels

Associated data

  • GENBANK/AF072457
  • GENBANK/AF072458
  • GENBANK/AF072459
  • GENBANK/AF072460
  • GENBANK/AF072461
  • GENBANK/AF072462
  • GENBANK/AF072463
  • GENBANK/AF073493