Transcriptional control of the iron-responsive fxbA gene by the mycobacterial regulator IdeR

J Bacteriol. 1999 Jun;181(11):3402-8. doi: 10.1128/JB.181.11.3402-3408.1999.

Abstract

Exochelin is the primary extracellular siderophore of Mycobacterium smegmatis, and the iron-regulated fxbA gene encodes a putative formyltransferase, an essential enzyme in the exochelin biosynthetic pathway (E. H. Fiss, Y. Yu, and W. R. Jacobs, Jr., Mol. Microbiol. 14:557-569, 1994). We investigated the regulation of fxbA by the mycobacterial IdeR, a homolog of the Corynebacterium diphtheriae iron regulator DtxR (M. P. Schmitt, M. Predich, L. Doukhan, I. Smith, and R. K. Holmes, Infect. Immun. 63:4284-4289, 1995). Gel mobility shift experiments showed that IdeR binds to the fxbA regulatory region in the presence of divalent metals. DNase I footprinting assays indicated that IdeR binding protects a 28-bp region containing a palindromic sequence of the fxbA promoter that was identified in primer extension assays. fxbA regulation was measured in M. smegmatis wild-type and ideR mutant strains containing fxbA promoter-lacZ fusions. These experiments confirmed that fxbA expression is negatively regulated by iron and showed that inactivation of ideR results in iron-independent expression of fxbA. However, the levels of its expression in the ideR mutant were approximately 50% lower than those in the wild-type strain under iron limitation, indicating an undefined positive role of IdeR in the regulation of fxbA.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Bacterial Proteins / genetics
  • Bacterial Proteins / metabolism*
  • Base Sequence
  • Binding Sites
  • Cations, Divalent / pharmacology
  • DNA Footprinting
  • DNA-Binding Proteins / genetics
  • DNA-Binding Proteins / metabolism
  • Gene Expression Regulation, Bacterial / drug effects*
  • Genes, Bacterial / genetics
  • Genes, Reporter
  • Hydroxymethyl and Formyl Transferases / genetics
  • Iron / pharmacology*
  • Mutation
  • Mycobacterium / drug effects
  • Mycobacterium / enzymology
  • Mycobacterium / genetics*
  • Promoter Regions, Genetic / genetics
  • Protein Binding / drug effects
  • RNA, Messenger / analysis
  • RNA, Messenger / genetics
  • Repressor Proteins*
  • Response Elements / genetics
  • Sequence Homology, Amino Acid
  • Transcription, Genetic / drug effects
  • Transcription, Genetic / genetics*
  • beta-Galactosidase / genetics
  • beta-Galactosidase / metabolism

Substances

  • Bacterial Proteins
  • Cations, Divalent
  • DNA-Binding Proteins
  • IdeR protein, Mycobacterium tuberculosis
  • RNA, Messenger
  • Repressor Proteins
  • Iron
  • Hydroxymethyl and Formyl Transferases
  • beta-Galactosidase