Delineation of conformational and structural features of the amikacin-Cu(II) complex in water solution by 13C-NMR spectroscopy

Spectrochim Acta A Mol Biomol Spectrosc. 1999 Jan;55A(1):205-10. doi: 10.1016/s1386-1425(98)00231-5.

Abstract

The copper (II) complex of amikacin in water solution at pH 5.5 was investigated by 13C-NMR. The temperature dependence of spin-lattice relaxation rates was measured and fast exchange conditions were shown to apply. The motional correlation time of the complex was approximated by the pseudo-isotropic rotational correlation time of free amikacin in water solution (tau c = 0.17 ns at 300 K). Formation of a pseudo-tetrahedral 1:1 complex was demonstrated by relaxation rates analysis and also by UV-Vis spectrophotometry. Two amino nitrogens of amikacin, together with the amide nitrogen and the hydroxyl in the hydroxyl-aminopropyl carbonyl side chain, were assigned as the copper-binding sites and a model of the complex was built by using copper-carbon distances obtained by NMR analysis as input parameters.

Publication types

  • Letter
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amikacin / chemistry*
  • Anti-Bacterial Agents / chemistry*
  • Carbohydrate Conformation
  • Carbohydrate Sequence
  • Carbon Isotopes
  • Copper / chemistry
  • Hydrogen-Ion Concentration
  • Magnetic Resonance Spectroscopy
  • Models, Molecular
  • Molecular Sequence Data
  • Solutions
  • Water

Substances

  • Anti-Bacterial Agents
  • Carbon Isotopes
  • Solutions
  • Water
  • Copper
  • Amikacin