The structure and function of the 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase from Haemophilus influenzae

J Mol Biol. 1999 Mar 26;287(2):211-9. doi: 10.1006/jmbi.1999.2623.

Abstract

The gene encoding the 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase of Haemophilus influenzae has been cloned and expressed in Escherichia coli. A complex of the purified protein with a substrate analog has been crystallized and its structure solved by multiple anomalous dispersion using phase information obtained from a single crystal of selenomethione-labeled protein. The enzyme folds into a four-stranded antiparallel beta-sheet flanked on one side by two alpha-helices and on the other by three consecutive alpha-helices, giving a novel beta1alpha1beta2beta3alpha2beta4alpha3alpha4alpha5 polypeptide topology. The three-dimensional structure of a binary complex has been refined at 2.1 A resolution. The location of the substrate analog and a sulfate ion gives important insight into the molecular mechanism of the enzyme.

MeSH terms

  • Adenosine Triphosphate / chemistry
  • Amino Acid Sequence
  • Binding Sites / genetics
  • Calorimetry, Differential Scanning
  • Cloning, Molecular
  • Crystallography, X-Ray
  • Diphosphotransferases / chemistry
  • Diphosphotransferases / genetics*
  • Enzyme Inhibitors / chemistry
  • Escherichia coli / genetics
  • Haemophilus influenzae / enzymology*
  • Models, Molecular
  • Molecular Sequence Data
  • Protein Conformation
  • Protein Structure, Secondary
  • Pterins / chemistry
  • Recombinant Proteins / genetics
  • Selenomethionine / chemistry
  • Sequence Alignment
  • Sequence Analysis, DNA
  • Spectrometry, Fluorescence
  • Ultracentrifugation

Substances

  • Enzyme Inhibitors
  • Pterins
  • Recombinant Proteins
  • Adenosine Triphosphate
  • Selenomethionine
  • Diphosphotransferases
  • 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase

Associated data

  • PDB/1CBK