van IJcken WFJ - Search Results

1

Epigenome analysis links gene regulatory elements in group 2 innate lymphocytes to asthma susceptibility.

Stadhouders R, Li BWS, de Bruijn MJW, Gomez A, Rao TN, Fehling HJ, van IJcken WFJ, Lim AI, Di Santo JP, Graf T, Hendriks RW. Stadhouders R, et al. Among authors: van ijcken wfj. J Allergy Clin Immunol. 2018 Dec;142(6):1793-1807. doi: 10.1016/j.jaci.2017.12.1006. Epub 2018 Mar 2. J Allergy Clin Immunol. 2018. PMID: 29486229

2

The genome-wide dynamics of the binding of Ldb1 complexes during erythroid differentiation.

Soler E, Andrieu-Soler C, de Boer E, Bryne JC, Thongjuea S, Stadhouders R, Palstra RJ, Stevens M, Kockx C, van Ijcken W, Hou J, Steinhoff C, Rijkers E, Lenhard B, Grosveld F. Soler E, et al. Genes Dev. 2010 Feb 1;24(3):277-89. doi: 10.1101/gad.551810. Genes Dev. 2010. PMID: 20123907 Free PMC article.

3

The DNA-binding protein CTCF limits proximal Vκ recombination and restricts κ enhancer interactions to the immunoglobulin κ light chain locus.

Ribeiro de Almeida C, Stadhouders R, de Bruijn MJ, Bergen IM, Thongjuea S, Lenhard B, van Ijcken W, Grosveld F, Galjart N, Soler E, Hendriks RW. Ribeiro de Almeida C, et al. Immunity. 2011 Oct 28;35(4):501-13. doi: 10.1016/j.immuni.2011.07.014. Immunity. 2011. PMID: 22035845 Free article.

4

Dynamic long-range chromatin interactions control Myb proto-oncogene transcription during erythroid development.

Stadhouders R, Thongjuea S, Andrieu-Soler C, Palstra RJ, Bryne JC, van den Heuvel A, Stevens M, de Boer E, Kockx C, van der Sloot A, van den Hout M, van Ijcken W, Eick D, Lenhard B, Grosveld F, Soler E. Stadhouders R, et al. EMBO J. 2012 Feb 15;31(4):986-99. doi: 10.1038/emboj.2011.450. Epub 2011 Dec 13. EMBO J. 2012. PMID: 22157820 Free PMC article.

5

The microtubule plus-end tracking protein CLASP2 is required for hematopoiesis and hematopoietic stem cell maintenance.

Drabek K, Gutiérrez L, Vermeij M, Clapes T, Patel SR, Boisset JC, van Haren J, Pereira AL, Liu Z, Akinci U, Nikolic T, van Ijcken W, van den Hout M, Meinders M, Melo C, Sambade C, Drabek D, Hendriks RW, Philipsen S, Mommaas M, Grosveld F, Maiato H, Italiano JE Jr, Robin C, Galjart N. Drabek K, et al. Cell Rep. 2012 Oct 25;2(4):781-8. doi: 10.1016/j.celrep.2012.08.040. Epub 2012 Oct 19. Cell Rep. 2012. PMID: 23084744 Free article.

6

Multiplexed chromosome conformation capture sequencing for rapid genome-scale high-resolution detection of long-range chromatin interactions.

Stadhouders R, Kolovos P, Brouwer R, Zuin J, van den Heuvel A, Kockx C, Palstra RJ, Wendt KS, Grosveld F, van Ijcken W, Soler E. Stadhouders R, et al. Nat Protoc. 2013 Mar;8(3):509-24. doi: 10.1038/nprot.2013.018. Epub 2013 Feb 14. Nat Protoc. 2013. PMID: 23411633

7

Pre-B cell receptor signaling induces immunoglobulin κ locus accessibility by functional redistribution of enhancer-mediated chromatin interactions.

Stadhouders R, de Bruijn MJ, Rother MB, Yuvaraj S, Ribeiro de Almeida C, Kolovos P, Van Zelm MC, van Ijcken W, Grosveld F, Soler E, Hendriks RW. Stadhouders R, et al. PLoS Biol. 2014 Feb 18;12(2):e1001791. doi: 10.1371/journal.pbio.1001791. eCollection 2014 Feb. PLoS Biol. 2014. PMID: 24558349 Free PMC article.

8

HBS1L-MYB intergenic variants modulate fetal hemoglobin via long-range MYB enhancers.

Stadhouders R, Aktuna S, Thongjuea S, Aghajanirefah A, Pourfarzad F, van Ijcken W, Lenhard B, Rooks H, Best S, Menzel S, Grosveld F, Thein SL, Soler E. Stadhouders R, et al. J Clin Invest. 2014 Apr;124(4):1699-710. doi: 10.1172/JCI71520. Epub 2014 Mar 10. J Clin Invest. 2014. PMID: 24614105 Free PMC article.

9

Nuclear positioning rather than contraction controls ordered rearrangements of immunoglobulin loci.

Rother MB, Palstra RJ, Jhunjhunwala S, van Kester KA, van IJcken WF, Hendriks RW, van Dongen JJ, Murre C, van Zelm MC. Rother MB, et al. Nucleic Acids Res. 2016 Jan 8;44(1):175-86. doi: 10.1093/nar/gkv928. Epub 2015 Sep 17. Nucleic Acids Res. 2016. PMID: 26384565 Free PMC article.

10

Unbiased Interrogation of 3D Genome Topology Using Chromosome Conformation Capture Coupled to High-Throughput Sequencing (4C-Seq).

Brouwer RW, van den Hout MC, van IJcken WF, Soler E, Stadhouders R. Brouwer RW, et al. Methods Mol Biol. 2017;1507:199-220. doi: 10.1007/978-1-4939-6518-2_15. Methods Mol Biol. 2017. PMID: 27832542

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