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Macromolecular diffractive imaging using imperfect crystals.
Ayyer K, Yefanov OM, Oberthür D, Roy-Chowdhury S, Galli L, Mariani V, Basu S, Coe J, Conrad CE, Fromme R, Schaffer A, Dörner K, James D, Kupitz C, Metz M, Nelson G, Xavier PL, Beyerlein KR, Schmidt M, Sarrou I, Spence JC, Weierstall U, White TA, Yang JH, Zhao Y, Liang M, Aquila A, Hunter MS, Robinson JS, Koglin JE, Boutet S, Fromme P, Barty A, Chapman HN. Ayyer K, et al. Among authors: zhao y. Nature. 2016 Feb 11;530(7589):202-6. doi: 10.1038/nature16949. Nature. 2016. PMID: 26863980 Free PMC article.
Lipidic cubic phase injector is a viable crystal delivery system for time-resolved serial crystallography.
Nogly P, Panneels V, Nelson G, Gati C, Kimura T, Milne C, Milathianaki D, Kubo M, Wu W, Conrad C, Coe J, Bean R, Zhao Y, Båth P, Dods R, Harimoorthy R, Beyerlein KR, Rheinberger J, James D, DePonte D, Li C, Sala L, Williams GJ, Hunter MS, Koglin JE, Berntsen P, Nango E, Iwata S, Chapman HN, Fromme P, Frank M, Abela R, Boutet S, Barty A, White TA, Weierstall U, Spence J, Neutze R, Schertler G, Standfuss J. Nogly P, et al. Among authors: zhao y. Nat Commun. 2016 Aug 22;7:12314. doi: 10.1038/ncomms12314. Nat Commun. 2016. PMID: 27545823 Free PMC article.
A novel inert crystal delivery medium for serial femtosecond crystallography.
Conrad CE, Basu S, James D, Wang D, Schaffer A, Roy-Chowdhury S, Zatsepin NA, Aquila A, Coe J, Gati C, Hunter MS, Koglin JE, Kupitz C, Nelson G, Subramanian G, White TA, Zhao Y, Zook J, Boutet S, Cherezov V, Spence JC, Fromme R, Weierstall U, Fromme P. Conrad CE, et al. Among authors: zhao y. IUCrJ. 2015 Jun 30;2(Pt 4):421-30. doi: 10.1107/S2052252515009811. eCollection 2015 Jul 1. IUCrJ. 2015. PMID: 26177184 Free PMC article.
Femtosecond structural dynamics drives the trans/cis isomerization in photoactive yellow protein.
Pande K, Hutchison CD, Groenhof G, Aquila A, Robinson JS, Tenboer J, Basu S, Boutet S, DePonte DP, Liang M, White TA, Zatsepin NA, Yefanov O, Morozov D, Oberthuer D, Gati C, Subramanian G, James D, Zhao Y, Koralek J, Brayshaw J, Kupitz C, Conrad C, Roy-Chowdhury S, Coe JD, Metz M, Xavier PL, Grant TD, Koglin JE, Ketawala G, Fromme R, Šrajer V, Henning R, Spence JC, Ourmazd A, Schwander P, Weierstall U, Frank M, Fromme P, Barty A, Chapman HN, Moffat K, van Thor JJ, Schmidt M. Pande K, et al. Among authors: zhao y. Science. 2016 May 6;352(6286):725-9. doi: 10.1126/science.aad5081. Epub 2016 May 5. Science. 2016. PMID: 27151871 Free PMC article.
Native phasing of x-ray free-electron laser data for a G protein-coupled receptor.
Batyuk A, Galli L, Ishchenko A, Han GW, Gati C, Popov PA, Lee MY, Stauch B, White TA, Barty A, Aquila A, Hunter MS, Liang M, Boutet S, Pu M, Liu ZJ, Nelson G, James D, Li C, Zhao Y, Spence JC, Liu W, Fromme P, Katritch V, Weierstall U, Stevens RC, Cherezov V. Batyuk A, et al. Among authors: zhao y. Sci Adv. 2016 Sep 23;2(9):e1600292. doi: 10.1126/sciadv.1600292. eCollection 2016 Sep. Sci Adv. 2016. PMID: 27679816 Free PMC article.
Enzyme intermediates captured "on the fly" by mix-and-inject serial crystallography.
Olmos JL Jr, Pandey S, Martin-Garcia JM, Calvey G, Katz A, Knoska J, Kupitz C, Hunter MS, Liang M, Oberthuer D, Yefanov O, Wiedorn M, Heyman M, Holl M, Pande K, Barty A, Miller MD, Stern S, Roy-Chowdhury S, Coe J, Nagaratnam N, Zook J, Verburgt J, Norwood T, Poudyal I, Xu D, Koglin J, Seaberg MH, Zhao Y, Bajt S, Grant T, Mariani V, Nelson G, Subramanian G, Bae E, Fromme R, Fung R, Schwander P, Frank M, White TA, Weierstall U, Zatsepin N, Spence J, Fromme P, Chapman HN, Pollack L, Tremblay L, Ourmazd A, Phillips GN Jr, Schmidt M. Olmos JL Jr, et al. Among authors: zhao y. BMC Biol. 2018 May 31;16(1):59. doi: 10.1186/s12915-018-0524-5. BMC Biol. 2018. PMID: 29848358 Free PMC article.
The phase problem for two-dimensional crystals. II. Simulations.
Arnal RD, Zhao Y, Mitra AK, Spence JCH, Millane RP. Arnal RD, et al. Among authors: zhao y. Acta Crystallogr A Found Adv. 2018 Sep 1;74(Pt 5):537-544. doi: 10.1107/S2053273318008707. Epub 2018 Sep 1. Acta Crystallogr A Found Adv. 2018. PMID: 30182940
XFEL and NMR Structures of Francisella Lipoprotein Reveal Conformational Space of Drug Target against Tularemia.
Zook J, Shekhar M, Hansen D, Conrad C, Grant T, Gupta C, White T, Barty A, Basu S, Zhao Y, Zatsepin N, Ishchenko A, Batyuk A, Gati C, Li C, Galli L, Coe J, Hunter M, Liang M, Weierstall U, Nelson G, James D, Stauch B, Craciunescu F, Thifault D, Liu W, Cherezov V, Singharoy A, Fromme P. Zook J, et al. Among authors: zhao y. Structure. 2020 May 5;28(5):540-547.e3. doi: 10.1016/j.str.2020.02.005. Epub 2020 Mar 5. Structure. 2020. PMID: 32142641 Free PMC article.
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