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The Sugar Metabolic Model of Aspergillus niger Can Only Be Reliably Transferred to Fungi of Its Phylum.
Li J, Chroumpi T, Garrigues S, Kun RS, Meng J, Salazar-Cerezo S, Aguilar-Pontes MV, Zhang Y, Tejomurthula S, Lipzen A, Ng V, Clendinen CS, Tolić N, Grigoriev IV, Tsang A, Mäkelä MR, Snel B, Peng M, de Vries RP. Li J, et al. Among authors: zhang y. J Fungi (Basel). 2022 Dec 17;8(12):1315. doi: 10.3390/jof8121315. J Fungi (Basel). 2022. PMID: 36547648 Free PMC article.
Detailed analysis of the D-galactose catabolic pathways in Aspergillus niger reveals complexity at both metabolic and regulatory level.
Chroumpi T, Martínez-Reyes N, Kun RS, Peng M, Lipzen A, Ng V, Tejomurthula S, Zhang Y, Grigoriev IV, Mäkelä MR, de Vries RP, Garrigues S. Chroumpi T, et al. Among authors: zhang y. Fungal Genet Biol. 2022 Apr;159:103670. doi: 10.1016/j.fgb.2022.103670. Epub 2022 Feb 2. Fungal Genet Biol. 2022. PMID: 35121171 Free article.
Stepwise recombination suppression around the mating-type locus in an ascomycete fungus with self-fertile spores.
Vittorelli N, Rodríguez de la Vega RC, Snirc A, Levert E, Gautier V, Lalanne C, De Filippo E, Gladieux P, Guillou S, Zhang Y, Tejomurthula S, Grigoriev IV, Debuchy R, Silar P, Giraud T, Hartmann FE. Vittorelli N, et al. Among authors: zhang y. PLoS Genet. 2023 Feb 10;19(2):e1010347. doi: 10.1371/journal.pgen.1010347. eCollection 2023 Feb. PLoS Genet. 2023. PMID: 36763677 Free PMC article.
IMA genome-F18 : The re-identification of Penicillium genomes available in NCBI and draft genomes for Penicillium species from dry cured meat, Penicillium biforme, P. brevicompactum, P. solitum, and P. cvjetkovicii, Pewenomyces kutranfy, Pew. lalenivora, Pew. tapulicola, Pew. kalosus, Teratosphaeria carnegiei, and Trichoderma atroviride SC1.
Visagie CM, Magistà D, Ferrara M, Balocchi F, Duong TA, Eichmeier A, Gramaje D, Aylward J, Baker SE, Barnes I, Calhoun S, De Angelis M, Frisvad JC, Hakalova E, Hayes RD, Houbraken J, Grigoriev IV, LaButti K, Leal C, Lipzen A, Ng V, Pangilinan J, Pecenka J, Perrone G, Piso A, Savage E, Spetik M, Wingfield MJ, Zhang Y, Wingfield BD. Visagie CM, et al. Among authors: zhang y. IMA Fungus. 2023 Oct 6;14(1):21. doi: 10.1186/s43008-023-00121-w. IMA Fungus. 2023. PMID: 37803441 Free PMC article. No abstract available.
Agave REVEILLE1 regulates the onset and release of seasonal dormancy in Populus.
Liu D, Tang D, Xie M, Zhang J, Zhai L, Mao J, Luo C, Lipzen A, Zhang Y, Savage E, Yuan G, Guo HB, Tadesse D, Hu R, Jawdy S, Cheng H, Li L, Yer H, Clark MM, Sun H, Shi J, Budhathoki R, Kumar R, Kamuda T, Li Y, Pennacchio C, Barry K, Schmutz J, Berry R, Muchero W, Chen JG, Li Y, Tuskan GA, Yang X. Liu D, et al. Among authors: zhang j, zhang y. Plant Physiol. 2023 Mar 17;191(3):1492-1504. doi: 10.1093/plphys/kiac588. Plant Physiol. 2023. PMID: 36546733 Free PMC article.
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