Zawaira A - Search Results

1

A discussion of molecular biology methods for protein engineering.

Zawaira A, Pooran A, Barichievy S, Chopera D. Zawaira A, et al. Mol Biotechnol. 2012 May;51(1):67-102. doi: 10.1007/s12033-011-9448-9. Mol Biotechnol. 2012. PMID: 21959889 Review.

2

Intersubtype differences in the effect of a rare p24 gag mutation on HIV-1 replicative fitness.

Chopera DR, Cotton LA, Zawaira A, Mann JK, Ngandu NK, Ntale R, Carlson JM, Mlisana K, Woodman Z, de Assis Rosa D, Martin E, Miura T, Pereyra F, Walker BD, Gray CM, Martin DP, Ndung'u T, Brockman MA, Karim SA, Brumme ZL, Williamson C; CAPRISA 002 Study Team. Chopera DR, et al. Among authors: zawaira a. J Virol. 2012 Dec;86(24):13423-33. doi: 10.1128/JVI.02171-12. Epub 2012 Sep 26. J Virol. 2012. PMID: 23015721 Free PMC article.

3

A simple recipe for the non-expert bioinformaticist for building experimentally-testable hypotheses for proteins with no known homologs.

Zawaira A, Shibayama Y. Zawaira A, et al. J Struct Funct Genomics. 2012 Dec;13(4):185-200. doi: 10.1007/s10969-012-9141-7. Epub 2012 Sep 7. J Struct Funct Genomics. 2012. PMID: 22956349 Review.

4

An expanded, unified substrate recognition site map for mammalian cytochrome P450s: analysis of molecular interactions between 15 mammalian CYP450 isoforms and 868 substrates.

Zawaira A, Ching LY, Coulson L, Blackburn J, Wei YC. Zawaira A, et al. Curr Drug Metab. 2011 Sep;12(7):684-700. doi: 10.2174/138920011796504554. Curr Drug Metab. 2011. PMID: 21740382

5

Exhaustive computational search of ionic-charge clusters that mediate interactions between mammalian cytochrome P450 (CYP) and P450-oxidoreductase (POR) proteins.

Zawaira A, Gallotta M, Beeton-Kempen N, Coulson L, Marais P, Kuttel M, Blackburn J. Zawaira A, et al. Comput Biol Chem. 2010 Feb;34(1):42-52. doi: 10.1016/j.compbiolchem.2009.10.006. Epub 2009 Oct 31. Comput Biol Chem. 2010. PMID: 19939736

6

On the deduction and analysis of singlet and two-state gating-models from the static structures of mammalian CYP450.

Zawaira A, Coulson L, Gallotta M, Karimanzira O, Blackburn J. Zawaira A, et al. J Struct Biol. 2011 Feb;173(2):282-93. doi: 10.1016/j.jsb.2010.09.026. Epub 2010 Oct 12. J Struct Biol. 2011. PMID: 20932908

7

Prediction of sites under adaptive evolution in cytochrome P450 sequences and their relationship to substrate recognition sites.

Zawaira A, Matimba A, Masimirembwa C. Zawaira A, et al. Pharmacogenet Genomics. 2008 Jun;18(6):467-76. doi: 10.1097/FPC.0b013e3282f9b68e. Pharmacogenet Genomics. 2008. PMID: 18496126

8

Computational analyses of the surface properties of protein-protein interfaces.

Gruber J, Zawaira A, Saunders R, Barrett CP, Noble ME. Gruber J, et al. Among authors: zawaira a. Acta Crystallogr D Biol Crystallogr. 2007 Jan;63(Pt 1):50-7. doi: 10.1107/S0907444906046762. Epub 2006 Dec 13. Acta Crystallogr D Biol Crystallogr. 2007. PMID: 17164526 Free PMC article. Review.

9

Exploiting structural principles to design cyclin-dependent kinase inhibitors.

Noble M, Barrett P, Endicott J, Johnson L, McDonnell J, Robertson G, Zawaira A. Noble M, et al. Among authors: zawaira a. Biochim Biophys Acta. 2005 Dec 30;1754(1-2):58-64. doi: 10.1016/j.bbapap.2005.08.019. Epub 2005 Sep 12. Biochim Biophys Acta. 2005. PMID: 16361058 Review.

10

Transcriptome analysis reveals defense-related genes and pathways during dodder (Cuscuta australis) parasitism on white clover (Trifolium repens).

Zhou L, Zawaira A, Lu Q, Yang B, Li J. Zhou L, et al. Among authors: zawaira a. Front Genet. 2023 Mar 16;14:1106936. doi: 10.3389/fgene.2023.1106936. eCollection 2023. Front Genet. 2023. PMID: 37007956 Free PMC article.

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