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Revising transcriptome assemblies with phylogenetic information.
Guang A, Howison M, Zapata F, Lawrence C, Dunn CW. Guang A, et al. Among authors: zapata f. PLoS One. 2021 Jan 12;16(1):e0244202. doi: 10.1371/journal.pone.0244202. eCollection 2021. PLoS One. 2021. PMID: 33434218 Free PMC article.
Agalma: an automated phylogenomics workflow.
Dunn CW, Howison M, Zapata F. Dunn CW, et al. Among authors: zapata f. BMC Bioinformatics. 2013 Nov 19;14:330. doi: 10.1186/1471-2105-14-330. BMC Bioinformatics. 2013. PMID: 24252138 Free PMC article.
Phylogenomic Analyses Support Traditional Relationships within Cnidaria.
Zapata F, Goetz FE, Smith SA, Howison M, Siebert S, Church SH, Sanders SM, Ames CL, McFadden CS, France SC, Daly M, Collins AG, Haddock SH, Dunn CW, Cartwright P. Zapata F, et al. PLoS One. 2015 Oct 14;10(10):e0139068. doi: 10.1371/journal.pone.0139068. eCollection 2015. PLoS One. 2015. PMID: 26465609 Free PMC article.
An Integrated Perspective on Phylogenetic Workflows.
Guang A, Zapata F, Howison M, Lawrence CE, Dunn CW. Guang A, et al. Among authors: zapata f. Trends Ecol Evol. 2016 Feb;31(2):116-126. doi: 10.1016/j.tree.2015.12.007. Epub 2016 Jan 5. Trends Ecol Evol. 2016. PMID: 26775796 Review.
185 results