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Page 1
Convergent and complementary selection shaped gains and losses of eusociality in sweat bees.
Jones BM, Rubin BER, Dudchenko O, Kingwell CJ, Traniello IM, Wang ZY, Kapheim KM, Wyman ES, Adastra PA, Liu W, Parsons LR, Jackson SR, Goodwin K, Davidson SM, McBride MJ, Webb AE, Omufwoko KS, Van Dorp N, Otárola MF, Pham M, Omer AD, Weisz D, Schraiber J, Villanea F, Wcislo WT, Paxton RJ, Hunt BG, Aiden EL, Kocher SD. Jones BM, et al. Among authors: weisz d. Nat Ecol Evol. 2023 Apr;7(4):557-569. doi: 10.1038/s41559-023-02001-3. Epub 2023 Mar 20. Nat Ecol Evol. 2023. PMID: 36941345
Topologically Associated Domains Delineate Susceptibility to Somatic Hypermutation.
Senigl F, Maman Y, Dinesh RK, Alinikula J, Seth RB, Pecnova L, Omer AD, Rao SSP, Weisz D, Buerstedde JM, Aiden EL, Casellas R, Hejnar J, Schatz DG. Senigl F, et al. Among authors: weisz d. Cell Rep. 2019 Dec 17;29(12):3902-3915.e8. doi: 10.1016/j.celrep.2019.11.039. Cell Rep. 2019. PMID: 31851922 Free PMC article.
The gene-rich genome of the scallop Pecten maximus.
Kenny NJ, McCarthy SA, Dudchenko O, James K, Betteridge E, Corton C, Dolucan J, Mead D, Oliver K, Omer AD, Pelan S, Ryan Y, Sims Y, Skelton J, Smith M, Torrance J, Weisz D, Wipat A, Aiden EL, Howe K, Williams ST. Kenny NJ, et al. Among authors: weisz d. Gigascience. 2020 May 1;9(5):giaa037. doi: 10.1093/gigascience/giaa037. Gigascience. 2020. PMID: 32352532 Free PMC article.
CTCF loss has limited effects on global genome architecture in Drosophila despite critical regulatory functions.
Kaushal A, Mohana G, Dorier J, Özdemir I, Omer A, Cousin P, Semenova A, Taschner M, Dergai O, Marzetta F, Iseli C, Eliaz Y, Weisz D, Shamim MS, Guex N, Lieberman Aiden E, Gambetta MC. Kaushal A, et al. Among authors: weisz d. Nat Commun. 2021 Feb 12;12(1):1011. doi: 10.1038/s41467-021-21366-2. Nat Commun. 2021. PMID: 33579945 Free PMC article.
High-quality reference genome for Clonorchis sinensis.
Young ND, Stroehlein AJ, Kinkar L, Wang T, Sohn WM, Chang BCH, Kaur P, Weisz D, Dudchenko O, Aiden EL, Korhonen PK, Gasser RB. Young ND, et al. Among authors: weisz d. Genomics. 2021 May;113(3):1605-1615. doi: 10.1016/j.ygeno.2021.03.001. Epub 2021 Mar 4. Genomics. 2021. PMID: 33677057 Free article.
3D genomics across the tree of life reveals condensin II as a determinant of architecture type.
Hoencamp C, Dudchenko O, Elbatsh AMO, Brahmachari S, Raaijmakers JA, van Schaik T, Sedeño Cacciatore Á, Contessoto VG, van Heesbeen RGHP, van den Broek B, Mhaskar AN, Teunissen H, St Hilaire BG, Weisz D, Omer AD, Pham M, Colaric Z, Yang Z, Rao SSP, Mitra N, Lui C, Yao W, Khan R, Moroz LL, Kohn A, St Leger J, Mena A, Holcroft K, Gambetta MC, Lim F, Farley E, Stein N, Haddad A, Chauss D, Mutlu AS, Wang MC, Young ND, Hildebrandt E, Cheng HH, Knight CJ, Burnham TLU, Hovel KA, Beel AJ, Mattei PJ, Kornberg RD, Warren WC, Cary G, Gómez-Skarmeta JL, Hinman V, Lindblad-Toh K, Di Palma F, Maeshima K, Multani AS, Pathak S, Nel-Themaat L, Behringer RR, Kaur P, Medema RH, van Steensel B, de Wit E, Onuchic JN, Di Pierro M, Lieberman Aiden E, Rowland BD. Hoencamp C, et al. Among authors: weisz d. Science. 2021 May 28;372(6545):984-989. doi: 10.1126/science.abe2218. Science. 2021. PMID: 34045355 Free PMC article.
A Chromosome-Length Reference Genome for the Endangered Pacific Pocket Mouse Reveals Recent Inbreeding in a Historically Large Population.
Wilder AP, Dudchenko O, Curry C, Korody M, Turbek SP, Daly M, Misuraca A, Wang G, Khan R, Weisz D, Fronczek J, Aiden EL, Houck ML, Shier DM, Ryder OA, Steiner CC. Wilder AP, et al. Among authors: weisz d. Genome Biol Evol. 2022 Aug 3;14(8):evac122. doi: 10.1093/gbe/evac122. Genome Biol Evol. 2022. PMID: 35894178 Free PMC article.
A chromosome-length genome assembly and annotation of blackberry (Rubus argutus, cv. "Hillquist").
Brůna T, Aryal R, Dudchenko O, Sargent DJ, Mead D, Buti M, Cavallini A, Hytönen T, Andrés J, Pham M, Weisz D, Mascagni F, Usai G, Natali L, Bassil N, Fernandez GE, Lomsadze A, Armour M, Olukolu B, Poorten T, Britton C, Davik J, Ashrafi H, Aiden EL, Borodovsky M, Worthington M. Brůna T, et al. Among authors: weisz d. G3 (Bethesda). 2023 Feb 9;13(2):jkac289. doi: 10.1093/g3journal/jkac289. G3 (Bethesda). 2023. PMID: 36331334 Free PMC article.
A Chromosome-length Assembly of the Black Petaltail (Tanypteryx hageni) Dragonfly.
Tolman ER, Beatty CD, Bush J, Kohli M, Moreno CM, Ware JL, Weber KS, Khan R, Maheshwari C, Weisz D, Dudchenko O, Aiden EL, Frandsen PB. Tolman ER, et al. Among authors: weisz d. Genome Biol Evol. 2023 Mar 3;15(3):evad024. doi: 10.1093/gbe/evad024. Genome Biol Evol. 2023. PMID: 36807678 Free PMC article.
212 results