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Cell phenotypes as macrostates of the GRN dynamics.
Borriello E, Walker SI, Laubichler MD. Borriello E, et al. Among authors: walker si. J Exp Zool B Mol Dev Evol. 2020 Jun;334(4):213-224. doi: 10.1002/jez.b.22938. Epub 2020 Mar 10. J Exp Zool B Mol Dev Evol. 2020. PMID: 32157818 Review.
Evolutionary dynamics and information hierarchies in biological systems.
Walker SI, Callahan BJ, Arya G, Barry JD, Bhattacharya T, Grigoryev S, Pellegrini M, Rippe K, Rosenberg SM. Walker SI, et al. Ann N Y Acad Sci. 2013 Dec;1305:1-17. doi: 10.1111/nyas.12140. Epub 2013 May 20. Ann N Y Acad Sci. 2013. PMID: 23691975 Review.
Prebiotic network evolution: six key parameters.
Nghe P, Hordijk W, Kauffman SA, Walker SI, Schmidt FJ, Kemble H, Yeates JA, Lehman N. Nghe P, et al. Among authors: walker si. Mol Biosyst. 2015 Dec;11(12):3206-17. doi: 10.1039/c5mb00593k. Mol Biosyst. 2015. PMID: 26490759 Review.
The informational architecture of the cell.
Walker SI, Kim H, Davies PC. Walker SI, et al. Philos Trans A Math Phys Eng Sci. 2016 Mar 13;374(2063):20150057. doi: 10.1098/rsta.2015.0057. Philos Trans A Math Phys Eng Sci. 2016. PMID: 26857675
The hidden simplicity of biology.
Davies PC, Walker SI. Davies PC, et al. Among authors: walker si. Rep Prog Phys. 2016 Oct;79(10):102601. doi: 10.1088/0034-4885/79/10/102601. Epub 2016 Sep 9. Rep Prog Phys. 2016. PMID: 27608530 Review.
Universal scaling across biochemical networks on Earth.
Kim H, Smith HB, Mathis C, Raymond J, Walker SI. Kim H, et al. Among authors: walker si. Sci Adv. 2019 Jan 16;5(1):eaau0149. doi: 10.1126/sciadv.aau0149. eCollection 2019 Jan. Sci Adv. 2019. PMID: 30746442 Free PMC article.
How causal analysis can reveal autonomy in models of biological systems.
Marshall W, Kim H, Walker SI, Tononi G, Albantakis L. Marshall W, et al. Among authors: walker si. Philos Trans A Math Phys Eng Sci. 2017 Dec 28;375(2109):20160358. doi: 10.1098/rsta.2016.0358. Philos Trans A Math Phys Eng Sci. 2017. PMID: 29133455 Free PMC article.
46 results