Vingron M - Search Results

1

Repression and 3D-restructuring resolves regulatory conflicts in evolutionarily rearranged genomes.

Ringel AR, Szabo Q, Chiariello AM, Chudzik K, Schöpflin R, Rothe P, Mattei AL, Zehnder T, Harnett D, Laupert V, Bianco S, Hetzel S, Glaser J, Phan MHQ, Schindler M, Ibrahim DM, Paliou C, Esposito A, Prada-Medina CA, Haas SA, Giere P, Vingron M, Wittler L, Meissner A, Nicodemi M, Cavalli G, Bantignies F, Mundlos S, Robson MI. Ringel AR, et al. Among authors: vingron m. Cell. 2022 Sep 29;185(20):3689-3704.e21. doi: 10.1016/j.cell.2022.09.006. Cell. 2022. PMID: 36179666 Free PMC article.

2

SYSTERS, GeneNest, SpliceNest: exploring sequence space from genome to protein.

Krause A, Haas SA, Coward E, Vingron M. Krause A, et al. Among authors: vingron m. Nucleic Acids Res. 2002 Jan 1;30(1):299-300. doi: 10.1093/nar/30.1.299. Nucleic Acids Res. 2002. PMID: 11752319 Free PMC article.

3

Genome-scale design of PCR primers and long oligomers for DNA microarrays.

Haas SA, Hild M, Wright AP, Hain T, Talibi D, Vingron M. Haas SA, et al. Among authors: vingron m. Nucleic Acids Res. 2003 Oct 1;31(19):5576-81. doi: 10.1093/nar/gkg752. Nucleic Acids Res. 2003. PMID: 14500820 Free PMC article.

4

Genome wide identification and classification of alternative splicing based on EST data.

Gupta S, Zink D, Korn B, Vingron M, Haas SA. Gupta S, et al. Among authors: vingron m. Bioinformatics. 2004 Nov 1;20(16):2579-85. doi: 10.1093/bioinformatics/bth288. Epub 2004 Apr 29. Bioinformatics. 2004. PMID: 15117759

5

Strengths and weaknesses of EST-based prediction of tissue-specific alternative splicing.

Gupta S, Zink D, Korn B, Vingron M, Haas SA. Gupta S, et al. Among authors: vingron m. BMC Genomics. 2004 Sep 28;5:72. doi: 10.1186/1471-2164-5-72. BMC Genomics. 2004. PMID: 15453915 Free PMC article.

6

T-STAG: resource and web-interface for tissue-specific transcripts and genes.

Gupta S, Vingron M, Haas SA. Gupta S, et al. Among authors: vingron m. Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W654-8. doi: 10.1093/nar/gki350. Nucleic Acids Res. 2005. PMID: 15980556 Free PMC article.

7

PASTAA: identifying transcription factors associated with sets of co-regulated genes.

Roider HG, Manke T, O'Keeffe S, Vingron M, Haas SA. Roider HG, et al. Among authors: vingron m. Bioinformatics. 2009 Feb 15;25(4):435-42. doi: 10.1093/bioinformatics/btn627. Epub 2008 Dec 9. Bioinformatics. 2009. PMID: 19073590 Free PMC article.

8

CpG-depleted promoters harbor tissue-specific transcription factor binding signals--implications for motif overrepresentation analyses.

Roider HG, Lenhard B, Kanhere A, Haas SA, Vingron M. Roider HG, et al. Among authors: vingron m. Nucleic Acids Res. 2009 Oct;37(19):6305-15. doi: 10.1093/nar/gkp682. Epub 2009 Sep 6. Nucleic Acids Res. 2009. PMID: 19736212 Free PMC article.

9

Prediction of alternative isoforms from exon expression levels in RNA-Seq experiments.

Richard H, Schulz MH, Sultan M, Nürnberger A, Schrinner S, Balzereit D, Dagand E, Rasche A, Lehrach H, Vingron M, Haas SA, Yaspo ML. Richard H, et al. Among authors: vingron m. Nucleic Acids Res. 2010 Jun;38(10):e112. doi: 10.1093/nar/gkq041. Epub 2010 Feb 11. Nucleic Acids Res. 2010. PMID: 20150413 Free PMC article.

10

Functional analysis and identification of cis-regulatory elements of human chromosome 21 gene promoters.

Warnatz HJ, Querfurth R, Guerasimova A, Cheng X, Haas SA, Hufton AL, Manke T, Vanhecke D, Nietfeld W, Vingron M, Janitz M, Lehrach H, Yaspo ML. Warnatz HJ, et al. Among authors: vingron m. Nucleic Acids Res. 2010 Oct;38(18):6112-23. doi: 10.1093/nar/gkq402. Epub 2010 May 21. Nucleic Acids Res. 2010. PMID: 20494980 Free PMC article.

Save citations to file

Email citations

Send citations to clipboard

Add to Collections

Add to My Bibliography

Create a file for external citation management software

Your saved search

Your RSS Feed

My NCBI Filters

Text availability

Article attribute

Article type

Publication date

289 results

Search Page