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Toward best practice in cancer mutation detection with whole-genome and whole-exome sequencing.
Nat Biotechnol. 2021 Sep;39(9):1141-1150. doi: 10.1038/s41587-021-00994-5. Epub 2021 Sep 9.
Nat Biotechnol. 2021.
PMID: 34504346
Free PMC article.
Establishing community reference samples, data and call sets for benchmarking cancer mutation detection using whole-genome sequencing.
Fang LT, Zhu B, Zhao Y, Chen W, Yang Z, Kerrigan L, Langenbach K, de Mars M, Lu C, Idler K, Jacob H, Zheng Y, Ren L, Yu Y, Jaeger E, Schroth GP, Abaan OD, Talsania K, Lack J, Shen TW, Chen Z, Stanbouly S, Tran B, Shetty J, Kriga Y, Meerzaman D, Nguyen C, Petitjean V, Sultan M, Cam M, Mehta M, Hung T, Peters E, Kalamegham R, Sahraeian SME, Mohiyuddin M, Guo Y, Yao L, Song L, Lam HYK, Drabek J, Vojta P, Maestro R, Gasparotto D, Kõks S, Reimann E, Scherer A, Nordlund J, Liljedahl U, Jensen RV, Pirooznia M, Li Z, Xiao C, Sherry ST, Kusko R, Moos M, Donaldson E, Tezak Z, Ning B, Tong W, Li J, Duerken-Hughes P, Catalanotti C, Maheshwari S, Shuga J, Liang WS, Keats J, Adkins J, Tassone E, Zismann V, McDaniel T, Trent J, Foox J, Butler D, Mason CE, Hong H, Shi L, Wang C, Xiao W; Somatic Mutation Working Group of Sequencing Quality Control Phase II Consortium.
Fang LT, et al.
Nat Biotechnol. 2021 Sep;39(9):1151-1160. doi: 10.1038/s41587-021-00993-6. Epub 2021 Sep 9.
Nat Biotechnol. 2021.
PMID: 34504347
Free PMC article.
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A Novel Rabbit Model of Retained Hemothorax with Pleural Organization.
De Vera CJ, Emerine RL, Girard RA, Sarva K, Jacob J, Azghani AO, Florence JM, Cook A, Norwood S, Singh KP, Komissarov AA, Florova G, Idell S.
De Vera CJ, et al.
Int J Mol Sci. 2023 Dec 29;25(1):470. doi: 10.3390/ijms25010470.
Int J Mol Sci. 2023.
PMID: 38203639
Free PMC article.
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Insights into the coordination chemistry of antineoplastic doxorubicin with 3d-transition metal ions Zn2+, Cu2+, and VO2+: a study using well-calibrated thermodynamic cycles and chemical interaction quantum chemistry models.
Reyna-Luna J, Soriano-Agueda L, Vera CJ, Franco-Pérez M.
Reyna-Luna J, et al. Among authors: vera cj.
J Comput Aided Mol Des. 2023 Jul;37(7):279-299. doi: 10.1007/s10822-023-00506-4. Epub 2023 May 28.
J Comput Aided Mol Des. 2023.
PMID: 37245168
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Targeting the PAI-1 Mechanism with a Small Peptide Increases the Efficacy of Alteplase in a Rabbit Model of Chronic Empyema.
Florova G, De Vera CJ, Emerine RL, Girard RA, Azghani AO, Sarva K, Jacob J, Morris DE, Chamiso M, Idell S, Komissarov AA.
Florova G, et al. Among authors: de vera cj.
Pharmaceutics. 2023 May 14;15(5):1498. doi: 10.3390/pharmaceutics15051498.
Pharmaceutics. 2023.
PMID: 37242740
Free PMC article.
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Tensile and tear strength of carrageenan film from Philippine eucheuma species.
Briones AV, Ambal WO, Estrella RR, Pangilinan R, De Vera CJ, Pacis RL, Rodriguez N, Villanueva MA.
Briones AV, et al. Among authors: de vera cj.
Mar Biotechnol (NY). 2004 Mar-Apr;6(2):148-51. doi: 10.1007/s10126-003-0005-9. Epub 2004 Apr 19.
Mar Biotechnol (NY). 2004.
PMID: 15085409
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