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Transient naive reprogramming corrects hiPS cells functionally and epigenetically.
Nature. 2023 Aug;620(7975):863-872. doi: 10.1038/s41586-023-06424-7. Epub 2023 Aug 16.
Nature. 2023.
PMID: 37587336
Free PMC article.
Recurrent acquisition of cytosine methyltransferases into eukaryotic retrotransposons.
de Mendoza A, Bonnet A, Vargas-Landin DB, Ji N, Li H, Yang F, Li L, Hori K, Pflueger J, Buckberry S, Ohta H, Rosic N, Lesage P, Lin S, Lister R.
de Mendoza A, et al. Among authors: vargas landin db.
Nat Commun. 2018 Apr 9;9(1):1341. doi: 10.1038/s41467-018-03724-9.
Nat Commun. 2018.
PMID: 29632298
Free PMC article.
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Author Correction: Recurrent acquisition of cytosine methyltransferases into eukaryotic retrotransposons.
de Mendoza A, Bonnet A, Vargas-Landin DB, Ji N, Li H, Yang F, Li L, Hori K, Pflueger J, Buckberry S, Ohta H, Rosic N, Lesage P, Lin S, Lister R.
de Mendoza A, et al. Among authors: vargas landin db.
Nat Commun. 2018 May 1;9(1):1811. doi: 10.1038/s41467-018-04260-2.
Nat Commun. 2018.
PMID: 29717194
Free PMC article.
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A single-cell atlas of entorhinal cortex from individuals with Alzheimer's disease reveals cell-type-specific gene expression regulation.
Grubman A, Chew G, Ouyang JF, Sun G, Choo XY, McLean C, Simmons RK, Buckberry S, Vargas-Landin DB, Poppe D, Pflueger J, Lister R, Rackham OJL, Petretto E, Polo JM.
Grubman A, et al. Among authors: vargas landin db.
Nat Neurosci. 2019 Dec;22(12):2087-2097. doi: 10.1038/s41593-019-0539-4.
Nat Neurosci. 2019.
PMID: 31768052
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Human prefrontal cortex gene regulatory dynamics from gestation to adulthood at single-cell resolution.
Herring CA, Simmons RK, Freytag S, Poppe D, Moffet JJD, Pflueger J, Buckberry S, Vargas-Landin DB, Clément O, Echeverría EG, Sutton GJ, Alvarez-Franco A, Hou R, Pflueger C, McDonald K, Polo JM, Forrest ARR, Nowak AK, Voineagu I, Martelotto L, Lister R.
Herring CA, et al. Among authors: vargas landin db.
Cell. 2022 Nov 10;185(23):4428-4447.e28. doi: 10.1016/j.cell.2022.09.039. Epub 2022 Oct 31.
Cell. 2022.
PMID: 36318921
Free article.
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Generation of Whole Genome Bisulfite Sequencing Libraries for Comprehensive DNA Methylome Analysis.
Vargas-Landin DB, Pflüger J, Lister R.
Vargas-Landin DB, et al.
Methods Mol Biol. 2018;1767:291-298. doi: 10.1007/978-1-4939-7774-1_16.
Methods Mol Biol. 2018.
PMID: 29524142
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LINE-1 Evasion of Epigenetic Repression in Humans.
Sanchez-Luque FJ, Kempen MHC, Gerdes P, Vargas-Landin DB, Richardson SR, Troskie RL, Jesuadian JS, Cheetham SW, Carreira PE, Salvador-Palomeque C, García-Cañadas M, Muñoz-Lopez M, Sanchez L, Lundberg M, Macia A, Heras SR, Brennan PM, Lister R, Garcia-Perez JL, Ewing AD, Faulkner GJ.
Sanchez-Luque FJ, et al. Among authors: vargas landin db.
Mol Cell. 2019 Aug 8;75(3):590-604.e12. doi: 10.1016/j.molcel.2019.05.024. Epub 2019 Jun 20.
Mol Cell. 2019.
PMID: 31230816
Free article.
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Activation of individual L1 retrotransposon instances is restricted to cell-type dependent permissive loci.
Philippe C, Vargas-Landin DB, Doucet AJ, van Essen D, Vera-Otarola J, Kuciak M, Corbin A, Nigumann P, Cristofari G.
Philippe C, et al. Among authors: vargas landin db.
Elife. 2016 Mar 26;5:e13926. doi: 10.7554/eLife.13926.
Elife. 2016.
PMID: 27016617
Free PMC article.
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