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Database constraints applied to metabolic pathway reconstruction tools.
Vilaplana J, Solsona F, Teixido I, Usié A, Karathia H, Alves R, Mateo J. Vilaplana J, et al. Among authors: usie a. ScientificWorldJournal. 2014;2014:967294. doi: 10.1155/2014/967294. Epub 2014 Aug 17. ScientificWorldJournal. 2014. PMID: 25202745 Free PMC article.
CheNER: chemical named entity recognizer.
Usié A, Alves R, Solsona F, Vázquez M, Valencia A. Usié A, et al. Bioinformatics. 2014 Apr 1;30(7):1039-40. doi: 10.1093/bioinformatics/btt639. Epub 2013 Nov 13. Bioinformatics. 2014. PMID: 24227678 Free PMC article.
The CHEMDNER corpus of chemicals and drugs and its annotation principles.
Krallinger M, Rabal O, Leitner F, Vazquez M, Salgado D, Lu Z, Leaman R, Lu Y, Ji D, Lowe DM, Sayle RA, Batista-Navarro RT, Rak R, Huber T, Rocktäschel T, Matos S, Campos D, Tang B, Xu H, Munkhdalai T, Ryu KH, Ramanan SV, Nathan S, Žitnik S, Bajec M, Weber L, Irmer M, Akhondi SA, Kors JA, Xu S, An X, Sikdar UK, Ekbal A, Yoshioka M, Dieb TM, Choi M, Verspoor K, Khabsa M, Giles CL, Liu H, Ravikumar KE, Lamurias A, Couto FM, Dai HJ, Tsai RT, Ata C, Can T, Usié A, Alves R, Segura-Bedmar I, Martínez P, Oyarzabal J, Valencia A. Krallinger M, et al. Among authors: usie a. J Cheminform. 2015 Jan 19;7(Suppl 1 Text mining for chemistry and the CHEMDNER track):S2. doi: 10.1186/1758-2946-7-S1-S2. eCollection 2015. J Cheminform. 2015. PMID: 25810773 Free PMC article.
17 results