Touzet H - Search Results

1

Efficient and accurate P-value computation for Position Weight Matrices.

Touzet H, Varré JS. Touzet H, et al. Algorithms Mol Biol. 2007 Dec 11;2:15. doi: 10.1186/1748-7188-2-15. Algorithms Mol Biol. 2007. PMID: 18072973 Free PMC article.

2

TFM-Explorer: mining cis-regulatory regions in genomes.

Tonon L, Touzet H, Varré JS. Tonon L, et al. Among authors: touzet h. Nucleic Acids Res. 2010 Jul;38(Web Server issue):W286-92. doi: 10.1093/nar/gkq473. Epub 2010 Jun 3. Nucleic Acids Res. 2010. PMID: 20522509 Free PMC article.

3

A complete protocol for whole-genome sequencing of virus from clinical samples: Application to coronavirus OC43.

Maurier F, Beury D, Fléchon L, Varré JS, Touzet H, Goffard A, Hot D, Caboche S. Maurier F, et al. Among authors: touzet h. Virology. 2019 May;531:141-148. doi: 10.1016/j.virol.2019.03.006. Epub 2019 Mar 9. Virology. 2019. PMID: 30878524 Free PMC article.

4

Use of whole-genome sequencing in the molecular investigation of care-associated HCoV-OC43 infections in a hematopoietic stem cell transplant unit.

Beury D, Fléchon L, Maurier F, Caboche S, Varré JS, Touzet H, Faure K, Dubuisson J, Hot D, Guery B, Goffard A. Beury D, et al. Among authors: touzet h. J Clin Virol. 2020 Jan;122:104206. doi: 10.1016/j.jcv.2019.104206. Epub 2019 Nov 16. J Clin Virol. 2020. PMID: 31783264 Free PMC article.

5

Comparative analysis of RNA genes: the caRNAc software.

Touzet H. Touzet H. Methods Mol Biol. 2007;395:465-74. doi: 10.1007/978-1-59745-514-5_29. Methods Mol Biol. 2007. PMID: 17993692

6

RNA locally optimal secondary structures.

Saffarian A, Giraud M, de Monte A, Touzet H. Saffarian A, et al. Among authors: touzet h. J Comput Biol. 2012 Oct;19(10):1120-33. doi: 10.1089/cmb.2010.0178. J Comput Biol. 2012. PMID: 23057822

7

Predicting transcription factor binding sites using local over-representation and comparative genomics.

Defrance M, Touzet H. Defrance M, et al. Among authors: touzet h. BMC Bioinformatics. 2006 Aug 31;7:396. doi: 10.1186/1471-2105-7-396. BMC Bioinformatics. 2006. PMID: 16945132 Free PMC article.

8

Computational identification of protein-coding sequences by comparative analysis.

Fontaine A, Touzet H. Fontaine A, et al. Among authors: touzet h. Int J Data Min Bioinform. 2009;3(2):160-76. doi: 10.1504/ijdmb.2009.024849. Int J Data Min Bioinform. 2009. PMID: 19517987

9

Deciphering metatranscriptomic data.

Kopylova E, Noé L, Da Silva C, Berthelot JF, Alberti A, Aury JM, Touzet H. Kopylova E, et al. Among authors: touzet h. Methods Mol Biol. 2015;1269:279-91. doi: 10.1007/978-1-4939-2291-8_17. Methods Mol Biol. 2015. PMID: 25577385

10

Modeling alternate RNA structures in genomic sequences.

Saffarian A, Giraud M, Touzet H. Saffarian A, et al. Among authors: touzet h. J Comput Biol. 2015 Mar;22(3):190-204. doi: 10.1089/cmb.2014.0272. J Comput Biol. 2015. PMID: 25768235

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