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The Gene Ontology knowledgebase in 2023.
Gene Ontology Consortium; Aleksander SA, Balhoff J, Carbon S, Cherry JM, Drabkin HJ, Ebert D, Feuermann M, Gaudet P, Harris NL, Hill DP, Lee R, Mi H, Moxon S, Mungall CJ, Muruganugan A, Mushayahama T, Sternberg PW, Thomas PD, Van Auken K, Ramsey J, Siegele DA, Chisholm RL, Fey P, Aspromonte MC, Nugnes MV, Quaglia F, Tosatto S, Giglio M, Nadendla S, Antonazzo G, Attrill H, Dos Santos G, Marygold S, Strelets V, Tabone CJ, Thurmond J, Zhou P, Ahmed SH, Asanitthong P, Luna Buitrago D, Erdol MN, Gage MC, Ali Kadhum M, Li KYC, Long M, Michalak A, Pesala A, Pritazahra A, Saverimuttu SCC, Su R, Thurlow KE, Lovering RC, Logie C, Oliferenko S, Blake J, Christie K, Corbani L, Dolan ME, Drabkin HJ, Hill DP, Ni L, Sitnikov D, Smith C, Cuzick A, Seager J, Cooper L, Elser J, Jaiswal P, Gupta P, Jaiswal P, Naithani S, Lera-Ramirez M, Rutherford K, Wood V, De Pons JL, Dwinell MR, Hayman GT, Kaldunski ML, Kwitek AE, Laulederkind SJF, Tutaj MA, Vedi M, Wang SJ, D'Eustachio P, Aimo L, Axelsen K, Bridge A, Hyka-Nouspikel N, Morgat A, Aleksander SA, Cherry JM, Engel SR, Karra K, Miyasato SR, Nash RS, Skrzypek MS, Weng S, Wong ED, Bakker E, Berardini TZ, Reiser L, Auchincloss A, Axelsen K, Argoud… See abstract for full author list ➔ Gene Ontology Consortium, et al. Among authors: tosatto s. Genetics. 2023 May 4;224(1):iyad031. doi: 10.1093/genetics/iyad031. Genetics. 2023. PMID: 36866529 Free PMC article. Review.
A STRP-ed definition of Structured Tandem Repeats in Proteins.
Monzon AM, Arrías PN, Elofsson A, Mier P, Andrade-Navarro MA, Bevilacqua M, Clementel D, Bateman A, Hirsh L, Fornasari MS, Parisi G, Piovesan D, Kajava AV, Tosatto SCE. Monzon AM, et al. Among authors: tosatto sce. J Struct Biol. 2023 Dec;215(4):108023. doi: 10.1016/j.jsb.2023.108023. Epub 2023 Aug 29. J Struct Biol. 2023. PMID: 37652396 Free article.
CAFA-evaluator: a Python tool for benchmarking ontological classification methods.
Piovesan D, Zago D, Joshi P, De Paolis Kaluza MC, Mehdiabadi M, Ramola R, Monzon AM, Reade W, Friedberg I, Radivojac P, Tosatto SCE. Piovesan D, et al. Among authors: tosatto sce. Bioinform Adv. 2024 Mar 14;4(1):vbae043. doi: 10.1093/bioadv/vbae043. eCollection 2024. Bioinform Adv. 2024. PMID: 38545087 Free PMC article.
A PDZ scaffolding/CaM-mediated pathway in Cryptochrome signaling.
Bellanda M, Damulewicz M, Zambelli B, Costanzi E, Gregoris F, Mammi S, Tosatto SCE, Costa R, Minervini G, Mazzotta GM. Bellanda M, et al. Among authors: tosatto sce. Protein Sci. 2024 Mar;33(3):e4914. doi: 10.1002/pro.4914. Protein Sci. 2024. PMID: 38358255
213 results