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Aboriginal mitogenomes reveal 50,000 years of regionalism in Australia.
Tobler R, Rohrlach A, Soubrier J, Bover P, Llamas B, Tuke J, Bean N, Abdullah-Highfold A, Agius S, O'Donoghue A, O'Loughlin I, Sutton P, Zilio F, Walshe K, Williams AN, Turney CSM, Williams M, Richards SM, Mitchell RJ, Kowal E, Stephen JR, Williams L, Haak W, Cooper A. Tobler R, et al. Nature. 2017 Apr 13;544(7649):180-184. doi: 10.1038/nature21416. Epub 2017 Mar 8. Nature. 2017. PMID: 28273067
genozip: a fast and efficient compression tool for VCF files.
Lan D, Tobler R, Souilmi Y, Llamas B. Lan D, et al. Among authors: tobler r. Bioinformatics. 2020 Jul 1;36(13):4091-4092. doi: 10.1093/bioinformatics/btaa290. Bioinformatics. 2020. PMID: 32407471 Free PMC article.
Genozip: a universal extensible genomic data compressor.
Lan D, Tobler R, Souilmi Y, Llamas B. Lan D, et al. Among authors: tobler r. Bioinformatics. 2021 Aug 25;37(16):2225-2230. doi: 10.1093/bioinformatics/btab102. Bioinformatics. 2021. PMID: 33585897 Free PMC article.
A global environmental crisis 42,000 years ago.
Cooper A, Turney CSM, Palmer J, Hogg A, McGlone M, Wilmshurst J, Lorrey AM, Heaton TJ, Russell JM, McCracken K, Anet JG, Rozanov E, Friedel M, Suter I, Peter T, Muscheler R, Adolphi F, Dosseto A, Faith JT, Fenwick P, Fogwill CJ, Hughen K, Lipson M, Liu J, Nowaczyk N, Rainsley E, Bronk Ramsey C, Sebastianelli P, Souilmi Y, Stevenson J, Thomas Z, Tobler R, Zech R. Cooper A, et al. Among authors: tobler r. Science. 2021 Feb 19;371(6531):811-818. doi: 10.1126/science.abb8677. Science. 2021. PMID: 33602851 Free article.
Systematic benchmark of ancient DNA read mapping.
Oliva A, Tobler R, Cooper A, Llamas B, Souilmi Y. Oliva A, et al. Among authors: tobler r. Brief Bioinform. 2021 Sep 2;22(5):bbab076. doi: 10.1093/bib/bbab076. Brief Bioinform. 2021. PMID: 33834210
Ethics of DNA research on human remains: five globally applicable guidelines.
Alpaslan-Roodenberg S, Anthony D, Babiker H, Bánffy E, Booth T, Capone P, Deshpande-Mukherjee A, Eisenmann S, Fehren-Schmitz L, Frachetti M, Fujita R, Frieman CJ, Fu Q, Gibbon V, Haak W, Hajdinjak M, Hofmann KP, Holguin B, Inomata T, Kanzawa-Kiriyama H, Keegan W, Kelso J, Krause J, Kumaresan G, Kusimba C, Kusimba S, Lalueza-Fox C, Llamas B, MacEachern S, Mallick S, Matsumura H, Morales-Arce AY, Matuzeviciute GM, Mushrif-Tripathy V, Nakatsuka N, Nores R, Ogola C, Okumura M, Patterson N, Pinhasi R, Prasad SPR, Prendergast ME, Punzo JL, Reich D, Sawafuji R, Sawchuk E, Schiffels S, Sedig J, Shnaider S, Sirak K, Skoglund P, Slon V, Snow M, Soressi M, Spriggs M, Stockhammer PW, Szécsényi-Nagy A, Thangaraj K, Tiesler V, Tobler R, Wang CC, Warinner C, Yasawardene S, Zahir M. Alpaslan-Roodenberg S, et al. Among authors: tobler r. Nature. 2021 Nov;599(7883):41-46. doi: 10.1038/s41586-021-04008-x. Epub 2021 Oct 20. Nature. 2021. PMID: 34671160 Free PMC article.
Admixture has obscured signals of historical hard sweeps in humans.
Souilmi Y, Tobler R, Johar A, Williams M, Grey ST, Schmidt J, Teixeira JC, Rohrlach A, Tuke J, Johnson O, Gower G, Turney C, Cox M, Cooper A, Huber CD. Souilmi Y, et al. Among authors: tobler r. Nat Ecol Evol. 2022 Dec;6(12):2003-2015. doi: 10.1038/s41559-022-01914-9. Epub 2022 Oct 31. Nat Ecol Evol. 2022. PMID: 36316412 Free PMC article.
65 results