Tianle Shi - Search Results

Year	Number of Results
2020	2
2021	4
2022	3
2023	6
2024	4

1

Plant-LncPipe: a computational pipeline providing significant improvement in plant lncRNA identification.

Tian XC, Chen ZY, Nie S, Shi TL, Yan XM, Bao YT, Li ZC, Ma HY, Jia KH, Zhao W, Mao JF. Tian XC, et al. Hortic Res. 2024 Feb 8;11(4):uhae041. doi: 10.1093/hr/uhae041. eCollection 2024 Apr. Hortic Res. 2024. PMID: 38638682 Free PMC article.

2

Telomere-to-telomere cultivated and wild soybean genome assembly provides insights into evolution and domestication under structural variation.

Jia KH, Zhang X, Li LL, Shi TL, Liu D, Yang Y, Cong Y, Li R, Pu Y, Gong Y, Chen X, Si YJ, Tian R, Qian Z, Ding H, Li N. Jia KH, et al. Plant Commun. 2024 Apr 10:100919. doi: 10.1016/j.xplc.2024.100919. Online ahead of print. Plant Commun. 2024. PMID: 38605518 Free article. No abstract available.

3

High-quality genome assembly enables prediction of allele-specific gene expression in hybrid poplar.

Shi TL, Jia KH, Bao YT, Nie S, Tian XC, Yan XM, Chen ZY, Li ZC, Zhao SW, Ma HY, Zhao Y, Li X, Zhang RG, Guo J, Zhao W, El-Kassaby YA, Müller N, Van de Peer Y, Wang XR, Street NR, Porth I, An X, Mao JF. Shi TL, et al. Plant Physiol. 2024 Apr 30;195(1):652-670. doi: 10.1093/plphys/kiae078. Plant Physiol. 2024. PMID: 38412470 Free PMC article.

4

Differential gene expression and potential regulatory network of fatty acid biosynthesis during fruit and leaf development in yellowhorn (Xanthoceras sorbifolium), an oil-producing tree with significant deployment values.

Shi TL, Ma HY, Wang X, Liu H, Yan XM, Tian XC, Li ZC, Bao YT, Chen ZY, Zhao SW, Xiang Q, Jia KH, Nie S, Guan W, Mao JF. Shi TL, et al. Front Plant Sci. 2024 Jan 19;14:1297817. doi: 10.3389/fpls.2023.1297817. eCollection 2023. Front Plant Sci. 2024. PMID: 38312356 Free PMC article.

5

Unraveling the evolutionary dynamics of the TPS gene family in land plants.

Yan XM, Zhou SS, Liu H, Zhao SW, Tian XC, Shi TL, Bao YT, Li ZC, Jia KH, Nie S, Guo JF, Kong L, Porth IM, Mao JF. Yan XM, et al. Front Plant Sci. 2023 Oct 12;14:1273648. doi: 10.3389/fpls.2023.1273648. eCollection 2023. Front Plant Sci. 2023. PMID: 37900760 Free PMC article.

6

Haplotype-resolved genome assembly of Coriaria nepalensis a non-legume nitrogen-fixing shrub.

Zhao SW, Guo JF, Kong L, Nie S, Yan XM, Shi TL, Tian XC, Ma HY, Bao YT, Li ZC, Chen ZY, Zhang RG, Ma YP, El-Kassaby YA, Porth I, Zhao W, Mao JF. Zhao SW, et al. Sci Data. 2023 May 9;10(1):259. doi: 10.1038/s41597-023-02171-6. Sci Data. 2023. PMID: 37156769 Free PMC article.

7

Subgenome-aware analyses suggest a reticulate allopolyploidization origin in three Papaver genomes.

Zhang RG, Lu C, Li GY, Lv J, Wang L, Wang ZX, Chen Z, Liu D, Zhao Y, Shi TL, Zhang W, Tang ZH, Mao JF, Ma YP, Jia KH, Zhao W. Zhang RG, et al. Nat Commun. 2023 Apr 19;14(1):2204. doi: 10.1038/s41467-023-37939-2. Nat Commun. 2023. PMID: 37076529 Free PMC article. No abstract available.

8

Unique gene duplications and conserved microsynteny potentially associated with resistance to wood decay in the Lauraceae.

Tian XC, Guo JF, Yan XM, Shi TL, Nie S, Zhao SW, Bao YT, Li ZC, Kong L, Su GJ, Mao JF, Lin J. Tian XC, et al. Front Plant Sci. 2023 Mar 8;14:1122549. doi: 10.3389/fpls.2023.1122549. eCollection 2023. Front Plant Sci. 2023. PMID: 36968354 Free PMC article.

9

Gapless genome assembly of azalea and multi-omics investigation into divergence between two species with distinct flower color.

Nie S, Zhao SW, Shi TL, Zhao W, Zhang RG, Tian XC, Guo JF, Yan XM, Bao YT, Li ZC, Kong L, Ma HY, Chen ZY, Liu H, El-Kassaby YA, Porth I, Yang FS, Mao JF. Nie S, et al. Hortic Res. 2022 Oct 26;10(1):uhac241. doi: 10.1093/hr/uhac241. eCollection 2023. Hortic Res. 2022. PMID: 36643737 Free PMC article.

10

Zbtb34 promotes embryonic stem cell proliferation by elongating telomere length.

Liu Z, Wei X, Gao Y, Gao X, Li X, Zhong Y, Wang X, Liu C, Shi T, Lv J, Liu T. Liu Z, et al. Among authors: shi t. Aging (Albany NY). 2022 Sep 12;14(17):7126-7136. doi: 10.18632/aging.204285. Epub 2022 Sep 12. Aging (Albany NY). 2022. PMID: 36098743 Free PMC article.

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