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Repeated out-of-Africa expansions of Helicobacter pylori driven by replacement of deleterious mutations.
Thorpe HA, Tourrette E, Yahara K, Vale FF, Liu S, Oleastro M, Alarcon T, Perets TT, Latifi-Navid S, Yamaoka Y, Martinez-Gonzalez B, Karayiannis I, Karamitros T, Sgouras DN, Elamin W, Pascoe B, Sheppard SK, Ronkainen J, Aro P, Engstrand L, Agreus L, Suerbaum S, Thorell K, Falush D. Thorpe HA, et al. Nat Commun. 2022 Nov 11;13(1):6842. doi: 10.1038/s41467-022-34475-3. Nat Commun. 2022. PMID: 36369175 Free PMC article.
Quantifying bacterial evolution in the wild: A birthday problem for Campylobacter lineages.
Calland JK, Pascoe B, Bayliss SC, Mourkas E, Berthenet E, Thorpe HA, Hitchings MD, Feil EJ, Corander J, Blaser MJ, Falush D, Sheppard SK. Calland JK, et al. Among authors: thorpe ha. PLoS Genet. 2021 Sep 28;17(9):e1009829. doi: 10.1371/journal.pgen.1009829. eCollection 2021 Sep. PLoS Genet. 2021. PMID: 34582435 Free PMC article.
Author Correction: Repeated out-of-Africa expansions of Helicobacter pylori driven by replacement of deleterious mutations.
Thorpe HA, Tourrette E, Yahara K, Vale FF, Liu S, Oleastro M, Alarcon T, Perets TT, Latifi-Navid S, Yamaoka Y, Martinez-Gonzalez B, Karayiannis I, Karamitros T, Sgouras DN, Elamin W, Pascoe B, Sheppard SK, Ronkainen J, Aro P, Engstrand L, Agreus L, Suerbaum S, Thorell K, Falush D. Thorpe HA, et al. Nat Commun. 2023 Mar 20;14(1):1539. doi: 10.1038/s41467-023-37302-5. Nat Commun. 2023. PMID: 36941300 Free PMC article. No abstract available.
Strong pathogen competition in neonatal gut colonisation.
Mäklin T, Thorpe HA, Pöntinen AK, Gladstone RA, Shao Y, Pesonen M, McNally A, Johnsen PJ, Samuelsen Ø, Lawley TD, Honkela A, Corander J. Mäklin T, et al. Among authors: thorpe ha. Nat Commun. 2022 Dec 1;13(1):7417. doi: 10.1038/s41467-022-35178-5. Nat Commun. 2022. PMID: 36456554 Free PMC article.
A large-scale genomic snapshot of Klebsiella spp. isolates in Northern Italy reveals limited transmission between clinical and non-clinical settings.
Thorpe HA, Booton R, Kallonen T, Gibbon MJ, Couto N, Passet V, López-Fernández S, Rodrigues C, Matthews L, Mitchell S, Reeve R, David S, Merla C, Corbella M, Ferrari C, Comandatore F, Marone P, Brisse S, Sassera D, Corander J, Feil EJ. Thorpe HA, et al. Nat Microbiol. 2022 Dec;7(12):2054-2067. doi: 10.1038/s41564-022-01263-0. Epub 2022 Nov 21. Nat Microbiol. 2022. PMID: 36411354 Free PMC article.
Population structure and antimicrobial resistance among Klebsiella isolates sampled from human, animal, and environmental sources in Ghana: a cross-sectional genomic One Health study.
Calland JK, Haukka K, Kpordze SW, Brusah A, Corbella M, Merla C, Samuelsen Ø, Feil EJ, Sassera D, Karikari AB, Saba CKS, Thorpe HA, Corander J. Calland JK, et al. Among authors: thorpe ha. Lancet Microbe. 2023 Nov;4(11):e943-e952. doi: 10.1016/S2666-5247(23)00208-2. Epub 2023 Oct 16. Lancet Microbe. 2023. PMID: 37858320 Free article.
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