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Patterning and folding of intestinal villi by active mesenchymal dewetting.
Huycke TR, Miyazaki H, Häkkinen TJ, Srivastava V, Barruet E, McGinnis CS, Kalantari A, Cornwall-Scoones J, Vaka D, Zhu Q, Jo H, DeGrado WF, Thomson M, Garikipati K, Boffelli D, Klein OD, Gartner ZJ. Huycke TR, et al. Among authors: thomson m. bioRxiv [Preprint]. 2023 Aug 15:2023.06.25.546328. doi: 10.1101/2023.06.25.546328. bioRxiv. 2023. PMID: 37425793 Free PMC article. Preprint.
Transcriptome-wide Analysis Reveals Hallmarks of Human Intestine Development and Maturation In Vitro and In Vivo.
Finkbeiner SR, Hill DR, Altheim CH, Dedhia PH, Taylor MJ, Tsai YH, Chin AM, Mahe MM, Watson CL, Freeman JJ, Nattiv R, Thomson M, Klein OD, Shroyer NF, Helmrath MA, Teitelbaum DH, Dempsey PJ, Spence JR. Finkbeiner SR, et al. Among authors: thomson m. Stem Cell Reports. 2015 Jun 3;4(6):1140-55. doi: 10.1016/j.stemcr.2015.04.010. Online ahead of print. Stem Cell Reports. 2015. PMID: 26050928 Free PMC article.
D-SPIN constructs gene regulatory network models from multiplexed scRNA-seq data revealing organizing principles of cellular perturbation response.
Jiang J, Chen S, Tsou T, McGinnis CS, Khazaei T, Zhu Q, Park JH, Strazhnik IM, Hanna J, Chow ED, Sivak DA, Gartner ZJ, Thomson M. Jiang J, et al. Among authors: thomson m. bioRxiv [Preprint]. 2023 May 20:2023.04.19.537364. doi: 10.1101/2023.04.19.537364. bioRxiv. 2023. PMID: 37131803 Free PMC article. Preprint.
Configurational entropy is an intrinsic driver of tissue structural heterogeneity.
Srivastava V, Hu JL, Garbe JC, Veytsman B, Shalabi SF, Yllanes D, Thomson M, LaBarge MA, Huber G, Gartner ZJ. Srivastava V, et al. Among authors: thomson m. bioRxiv [Preprint]. 2023 Jul 2:2023.07.01.546933. doi: 10.1101/2023.07.01.546933. bioRxiv. 2023. PMID: 37425903 Free PMC article. Preprint.
1,509 results