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Contextualizing Wastewater-Based surveillance in the COVID-19 vaccination era.
Armas F, Chandra F, Lee WL, Gu X, Chen H, Xiao A, Leifels M, Wuertz S, Alm EJ, Thompson J. Armas F, et al. Among authors: thompson j. Environ Int. 2023 Jan;171:107718. doi: 10.1016/j.envint.2022.107718. Epub 2022 Dec 23. Environ Int. 2023. PMID: 36584425 Free PMC article. Review.
SARS-CoV-2 titers in wastewater foreshadow dynamics and clinical presentation of new COVID-19 cases.
Wu F, Xiao A, Zhang J, Moniz K, Endo N, Armas F, Bonneau R, Brown MA, Bushman M, Chai PR, Duvallet C, Erickson TB, Foppe K, Ghaeli N, Gu X, Hanage WP, Huang KH, Lee WL, Matus M, McElroy KA, Nagler J, Rhode SF, Santillana M, Tucker JA, Wuertz S, Zhao S, Thompson J, Alm EJ. Wu F, et al. Among authors: thompson j. medRxiv [Preprint]. 2020 Jul 6:2020.06.15.20117747. doi: 10.1101/2020.06.15.20117747. medRxiv. 2020. PMID: 32607521 Free PMC article. Updated. Preprint.
SARS-CoV-2 Titers in Wastewater Are Higher than Expected from Clinically Confirmed Cases.
Wu F, Zhang J, Xiao A, Gu X, Lee WL, Armas F, Kauffman K, Hanage W, Matus M, Ghaeli N, Endo N, Duvallet C, Poyet M, Moniz K, Washburne AD, Erickson TB, Chai PR, Thompson J, Alm EJ. Wu F, et al. Among authors: thompson j. mSystems. 2020 Jul 21;5(4):e00614-20. doi: 10.1128/mSystems.00614-20. mSystems. 2020. PMID: 32694130 Free PMC article.
Wastewater surveillance of SARS-CoV-2 across 40 U.S. states from February to June 2020.
Wu F, Xiao A, Zhang J, Moniz K, Endo N, Armas F, Bushman M, Chai PR, Duvallet C, Erickson TB, Foppe K, Ghaeli N, Gu X, Hanage WP, Huang KH, Lee WL, McElroy KA, Rhode SF, Matus M, Wuertz S, Thompson J, Alm EJ. Wu F, et al. Among authors: thompson j. Water Res. 2021 Sep 1;202:117400. doi: 10.1016/j.watres.2021.117400. Epub 2021 Jul 2. Water Res. 2021. PMID: 34274898 Free PMC article.
SARS-CoV-2 RNA concentrations in wastewater foreshadow dynamics and clinical presentation of new COVID-19 cases.
Wu F, Xiao A, Zhang J, Moniz K, Endo N, Armas F, Bonneau R, Brown MA, Bushman M, Chai PR, Duvallet C, Erickson TB, Foppe K, Ghaeli N, Gu X, Hanage WP, Huang KH, Lee WL, Matus M, McElroy KA, Nagler J, Rhode SF, Santillana M, Tucker JA, Wuertz S, Zhao S, Thompson J, Alm EJ. Wu F, et al. Among authors: thompson j. Sci Total Environ. 2022 Jan 20;805:150121. doi: 10.1016/j.scitotenv.2021.150121. Epub 2021 Sep 4. Sci Total Environ. 2022. PMID: 34534872 Free PMC article.
Minimizing errors in RT-PCR detection and quantification of SARS-CoV-2 RNA for wastewater surveillance.
Ahmed W, Simpson SL, Bertsch PM, Bibby K, Bivins A, Blackall LL, Bofill-Mas S, Bosch A, Brandão J, Choi PM, Ciesielski M, Donner E, D'Souza N, Farnleitner AH, Gerrity D, Gonzalez R, Griffith JF, Gyawali P, Haas CN, Hamilton KA, Hapuarachchi HC, Harwood VJ, Haque R, Jackson G, Khan SJ, Khan W, Kitajima M, Korajkic A, La Rosa G, Layton BA, Lipp E, McLellan SL, McMinn B, Medema G, Metcalfe S, Meijer WG, Mueller JF, Murphy H, Naughton CC, Noble RT, Payyappat S, Petterson S, Pitkänen T, Rajal VB, Reyneke B, Roman FA Jr, Rose JB, Rusiñol M, Sadowsky MJ, Sala-Comorera L, Setoh YX, Sherchan SP, Sirikanchana K, Smith W, Steele JA, Sabburg R, Symonds EM, Thai P, Thomas KV, Tynan J, Toze S, Thompson J, Whiteley AS, Wong JCC, Sano D, Wuertz S, Xagoraraki I, Zhang Q, Zimmer-Faust AG, Shanks OC. Ahmed W, et al. Among authors: thompson j. Sci Total Environ. 2022 Jan 20;805:149877. doi: 10.1016/j.scitotenv.2021.149877. Epub 2021 Aug 25. Sci Total Environ. 2022. PMID: 34818780 Free PMC article. Review.
Gut Ruminococcaceae levels at baseline correlate with risk of antibiotic-associated diarrhea.
Gu X, Sim JXY, Lee WL, Cui L, Chan YFZ, Chang ED, Teh YE, Zhang AN, Armas F, Chandra F, Chen H, Zhao S, Lee Z, Thompson JR, Ooi EE, Low JG, Alm EJ, Kalimuddin S. Gu X, et al. Among authors: thompson jr. iScience. 2021 Dec 16;25(1):103644. doi: 10.1016/j.isci.2021.103644. eCollection 2022 Jan 21. iScience. 2021. PMID: 35005566 Free PMC article.
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