Thomas Dandekar - Search Results

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Results by year

Year	Number of Results
2002	3
2003	5
2004	9
2005	10
2006	15
2007	8
2008	15
2009	11
2010	15
2011	9
2012	16
2013	13
2014	21
2015	17
2016	13
2017	12
2018	15
2019	17
2020	19
2021	24
2022	28
2023	15
2024	5

288 results

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An orchestra of machine learning methods reveals landmarks in single-cell data exemplified with aging fibroblasts.

Rasbach L, Caliskan A, Saderi F, Dandekar T, Breitenbach T. Rasbach L, et al. Among authors: dandekar t. PLoS One. 2024 Apr 17;19(4):e0302045. doi: 10.1371/journal.pone.0302045. eCollection 2024. PLoS One. 2024. PMID: 38630692 Free PMC article.

Cat-E: A comprehensive web tool for exploring cancer targeting strategies.

Salihoglu R, Balkenhol J, Dandekar G, Liang C, Dandekar T, Bencurova E. Salihoglu R, et al. Among authors: dandekar t. Comput Struct Biotechnol J. 2024 Mar 27;23:1376-1386. doi: 10.1016/j.csbj.2024.03.024. eCollection 2024 Dec. Comput Struct Biotechnol J. 2024. PMID: 38596315 Free PMC article.

The post-stroke young adult brain has limited capacity to re-express the gene expression patterns seen during early postnatal brain development.

Ruscu M, Capitanescu B, Rupek P, Dandekar T, Radu E, Hermann DM, Popa-Wagner A. Ruscu M, et al. Among authors: dandekar t. Brain Pathol. 2024 Jan 10:e13232. doi: 10.1111/bpa.13232. Online ahead of print. Brain Pathol. 2024. PMID: 38198833

Signaling network analysis reveals fostamatinib as a potential drug to control platelet hyperactivation during SARS-CoV-2 infection.

Osmanoglu Ö, Gupta SK, Almasi A, Yagci S, Srivastava M, Araujo GHM, Nagy Z, Balkenhol J, Dandekar T. Osmanoglu Ö, et al. Among authors: dandekar t. Front Immunol. 2023 Dec 21;14:1285345. doi: 10.3389/fimmu.2023.1285345. eCollection 2023. Front Immunol. 2023. PMID: 38187394 Free PMC article.

Targeting antimalarial metabolites from the actinomycetes associated with the Red Sea sponge Callyspongia siphonella using a metabolomic method.

Gamaleldin NM, Bahr HS, Millán-Aguiñaga N, Danesh M, Othman EM, Dandekar T, Hassan HM, Abdelmohsen UR. Gamaleldin NM, et al. Among authors: dandekar t. BMC Microbiol. 2023 Dec 12;23(1):396. doi: 10.1186/s12866-023-03094-3. BMC Microbiol. 2023. PMID: 38087203 Free PMC article.

Metadata integrity in bioinformatics: Bridging the gap between data and knowledge.

Caliskan A, Dangwal S, Dandekar T. Caliskan A, et al. Among authors: dandekar t. Comput Struct Biotechnol J. 2023 Oct 5;21:4895-4913. doi: 10.1016/j.csbj.2023.10.006. eCollection 2023. Comput Struct Biotechnol J. 2023. PMID: 37860229 Free PMC article. Review.

Endothelial barrier dysfunction in systemic inflammation is mediated by soluble VE-cadherin interfering VE-PTP signaling.

Knop JL, Burkard N, Danesh M, Kintrup S, Dandekar T, Srivastava M, Springer R, Hiermaier M, Wagner NM, Waschke J, Flemming S, Schlegel N. Knop JL, et al. Among authors: dandekar t. iScience. 2023 Sep 27;26(10):108049. doi: 10.1016/j.isci.2023.108049. eCollection 2023 Oct 20. iScience. 2023. PMID: 37822505 Free PMC article.

Calcineurin and mTOR inhibitors in kidney transplantation: integrative metamodeling on transplant survival and kidney function.

Khalid H, Fareed MM, Dandekar T, Shityakov S. Khalid H, et al. Among authors: dandekar t. Int Urol Nephrol. 2024 Apr;56(4):1403-1414. doi: 10.1007/s11255-023-03754-3. Epub 2023 Sep 26. Int Urol Nephrol. 2024. PMID: 37751051

How to make DNA data storage more applicable.

Akash A, Bencurova E, Dandekar T. Akash A, et al. Among authors: dandekar t. Trends Biotechnol. 2024 Jan;42(1):17-30. doi: 10.1016/j.tibtech.2023.07.006. Epub 2023 Aug 15. Trends Biotechnol. 2024. PMID: 37591721 Review.

Optimized cell type signatures revealed from single-cell data by combining principal feature analysis, mutual information, and machine learning.

Caliskan A, Caliskan D, Rasbach L, Yu W, Dandekar T, Breitenbach T. Caliskan A, et al. Among authors: dandekar t. Comput Struct Biotechnol J. 2023 Jun 5;21:3293-3314. doi: 10.1016/j.csbj.2023.06.002. eCollection 2023. Comput Struct Biotechnol J. 2023. PMID: 37333862 Free PMC article.

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