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KnotProt: a database of proteins with knots and slipknots.
Jamroz M, Niemyska W, Rawdon EJ, Stasiak A, Millett KC, Sułkowski P, Sulkowska JI. Jamroz M, et al. Among authors: sulkowska ji. Nucleic Acids Res. 2015 Jan;43(Database issue):D306-14. doi: 10.1093/nar/gku1059. Epub 2014 Oct 31. Nucleic Acids Res. 2015. PMID: 25361973 Free PMC article.
Tightening of knots in proteins.
Sułkowska JI, Sułkowski P, Szymczak P, Cieplak M. Sułkowska JI, et al. Phys Rev Lett. 2008 Feb 8;100(5):058106. doi: 10.1103/PhysRevLett.100.058106. Epub 2008 Feb 8. Phys Rev Lett. 2008. PMID: 18352439
Stabilizing effect of knots on proteins.
Sułkowska JI, Sulkowski P, Szymczak P, Cieplak M. Sułkowska JI, et al. Proc Natl Acad Sci U S A. 2008 Dec 16;105(50):19714-9. doi: 10.1073/pnas.0805468105. Epub 2008 Dec 8. Proc Natl Acad Sci U S A. 2008. PMID: 19064918 Free PMC article.
Dodging the crisis of folding proteins with knots.
Sułkowska JI, Sułkowski P, Onuchic J. Sułkowska JI, et al. Proc Natl Acad Sci U S A. 2009 Mar 3;106(9):3119-24. doi: 10.1073/pnas.0811147106. Epub 2009 Feb 11. Proc Natl Acad Sci U S A. 2009. PMID: 19211785 Free PMC article.
Untying knots in proteins.
Sułkowska JI, Sułkowski P, Szymczak P, Cieplak M. Sułkowska JI, et al. J Am Chem Soc. 2010 Oct 13;132(40):13954-6. doi: 10.1021/ja102441z. J Am Chem Soc. 2010. PMID: 20857930
BSDB: the biomolecule stretching database.
Sikora M, Sulkowska JI, Witkowski BS, Cieplak M. Sikora M, et al. Among authors: sulkowska ji. Nucleic Acids Res. 2011 Jan;39(Database issue):D443-50. doi: 10.1093/nar/gkq851. Epub 2010 Oct 6. Nucleic Acids Res. 2011. PMID: 20929872 Free PMC article.
Conservation of complex knotting and slipknotting patterns in proteins.
Sułkowska JI, Rawdon EJ, Millett KC, Onuchic JN, Stasiak A. Sułkowska JI, et al. Proc Natl Acad Sci U S A. 2012 Jun 26;109(26):E1715-23. doi: 10.1073/pnas.1205918109. Epub 2012 Jun 8. Proc Natl Acad Sci U S A. 2012. PMID: 22685208 Free PMC article.
Knotting pathways in proteins.
Sułkowska JI, Noel JK, Ramírez-Sarmiento CA, Rawdon EJ, Millett KC, Onuchic JN. Sułkowska JI, et al. Biochem Soc Trans. 2013 Apr;41(2):523-7. doi: 10.1042/BST20120342. Biochem Soc Trans. 2013. PMID: 23514147 Review.
Identifying knots in proteins.
Millett KC, Rawdon EJ, Stasiak A, Sułkowska JI. Millett KC, et al. Among authors: sulkowska ji. Biochem Soc Trans. 2013 Apr;41(2):533-7. doi: 10.1042/BST20120339. Biochem Soc Trans. 2013. PMID: 23514149 Review.
70 results