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Genetic tracing of market wildlife and viruses at the epicenter of the COVID-19 pandemic.
Crits-Christoph A, Levy JI, Pekar JE, Goldstein SA, Singh R, Hensel Z, Gangavarapu K, Rogers MB, Moshiri N, Garry RF, Holmes EC, Koopmans MPG, Lemey P, Popescu S, Rambaut A, Robertson DL, Suchard MA, Wertheim JO, Rasmussen AL, Andersen KG, Worobey M, Débarre F. Crits-Christoph A, et al. Among authors: suchard ma. bioRxiv [Preprint]. 2023 Sep 14:2023.09.13.557637. doi: 10.1101/2023.09.13.557637. bioRxiv. 2023. PMID: 37745602 Free PMC article. Preprint.
Many-core algorithms for statistical phylogenetics.
Suchard MA, Rambaut A. Suchard MA, et al. Bioinformatics. 2009 Jun 1;25(11):1370-6. doi: 10.1093/bioinformatics/btp244. Epub 2009 Apr 15. Bioinformatics. 2009. PMID: 19369496 Free PMC article.
Bayesian phylogeography finds its roots.
Lemey P, Rambaut A, Drummond AJ, Suchard MA. Lemey P, et al. Among authors: suchard ma. PLoS Comput Biol. 2009 Sep;5(9):e1000520. doi: 10.1371/journal.pcbi.1000520. Epub 2009 Sep 25. PLoS Comput Biol. 2009. PMID: 19779555 Free PMC article.
Phylodynamics and human-mediated dispersal of a zoonotic virus.
Talbi C, Lemey P, Suchard MA, Abdelatif E, Elharrak M, Nourlil J, Faouzi A, Echevarría JE, Vazquez Morón S, Rambaut A, Campiz N, Tatem AJ, Holmes EC, Bourhy H. Talbi C, et al. Among authors: suchard ma. PLoS Pathog. 2010 Oct 28;6(10):e1001166. doi: 10.1371/journal.ppat.1001166. PLoS Pathog. 2010. PMID: 21060816 Free PMC article.
Spatial dynamics of human-origin H1 influenza A virus in North American swine.
Nelson MI, Lemey P, Tan Y, Vincent A, Lam TT, Detmer S, Viboud C, Suchard MA, Rambaut A, Holmes EC, Gramer M. Nelson MI, et al. Among authors: suchard ma. PLoS Pathog. 2011 Jun;7(6):e1002077. doi: 10.1371/journal.ppat.1002077. Epub 2011 Jun 9. PLoS Pathog. 2011. PMID: 21695237 Free PMC article.
SPREAD: spatial phylogenetic reconstruction of evolutionary dynamics.
Bielejec F, Rambaut A, Suchard MA, Lemey P. Bielejec F, et al. Among authors: suchard ma. Bioinformatics. 2011 Oct 15;27(20):2910-2. doi: 10.1093/bioinformatics/btr481. Epub 2011 Sep 11. Bioinformatics. 2011. PMID: 21911333 Free PMC article.
Bayesian phylogenetics with BEAUti and the BEAST 1.7.
Drummond AJ, Suchard MA, Xie D, Rambaut A. Drummond AJ, et al. Among authors: suchard ma. Mol Biol Evol. 2012 Aug;29(8):1969-73. doi: 10.1093/molbev/mss075. Epub 2012 Feb 25. Mol Biol Evol. 2012. PMID: 22367748 Free PMC article.
343 results