Srivastava R - Search Results

1

A conserved enhancer regulates Il9 expression in multiple lineages.

Koh B, Abdul Qayum A, Srivastava R, Fu Y, Ulrich BJ, Janga SC, Kaplan MH. Koh B, et al. Among authors: srivastava r. Nat Commun. 2018 Nov 15;9(1):4803. doi: 10.1038/s41467-018-07202-0. Nat Commun. 2018. PMID: 30442929 Free PMC article.

2

An intricate network of conserved DNA upstream motifs and associated transcription factors regulate the expression of uromodulin gene.

Srivastava R, Micanovic R, El-Achkar TM, Janga SC. Srivastava R, et al. J Urol. 2014 Sep;192(3):981-9. doi: 10.1016/j.juro.2014.02.095. Epub 2014 Mar 1. J Urol. 2014. PMID: 24594405

3

Seten: a tool for systematic identification and comparison of processes, phenotypes, and diseases associated with RNA-binding proteins from condition-specific CLIP-seq profiles.

Budak G, Srivastava R, Janga SC. Budak G, et al. Among authors: srivastava r. RNA. 2017 Jun;23(6):836-846. doi: 10.1261/rna.059089.116. Epub 2017 Mar 23. RNA. 2017. PMID: 28336542 Free PMC article.

4

SliceIt: A genome-wide resource and visualization tool to design CRISPR/Cas9 screens for editing protein-RNA interaction sites in the human genome.

Vemuri S, Srivastava R, Mir Q, Hashemikhabir S, Dong XC, Janga SC. Vemuri S, et al. Among authors: srivastava r. Methods. 2020 Jun 1;178:104-113. doi: 10.1016/j.ymeth.2019.09.004. Epub 2019 Sep 5. Methods. 2020. PMID: 31494246 Free PMC article.

5

Granzyme A-producing T helper cells are critical for acute graft-versus-host disease.

Park S, Griesenauer B, Jiang H, Adom D, Mehrpouya-Bahrami P, Chakravorty S, Kazemian M, Imam T, Srivastava R, Hayes TA, Pardo J, Janga SC, Paczesny S, Kaplan MH, Olson MR. Park S, et al. Among authors: srivastava r. JCI Insight. 2020 Sep 17;5(18):e124465. doi: 10.1172/jci.insight.124465. JCI Insight. 2020. PMID: 32809971 Free PMC article.

6

Role of SARS-CoV-2 in Altering the RNA-Binding Protein and miRNA-Directed Post-Transcriptional Regulatory Networks in Humans.

Srivastava R, Daulatabad SV, Srivastava M, Janga SC. Srivastava R, et al. Among authors: srivastava m. Int J Mol Sci. 2020 Sep 25;21(19):7090. doi: 10.3390/ijms21197090. Int J Mol Sci. 2020. PMID: 32993015 Free PMC article.

7

Transcriptome-wide high-throughput mapping of protein-RNA occupancy profiles using POP-seq.

Srivastava M, Srivastava R, Janga SC. Srivastava M, et al. Among authors: srivastava r. Sci Rep. 2021 Jan 13;11(1):1175. doi: 10.1038/s41598-020-80846-5. Sci Rep. 2021. PMID: 33441968 Free PMC article.

8

CASowary: CRISPR-Cas13 guide RNA predictor for transcript depletion.

Krohannon A, Srivastava M, Rauch S, Srivastava R, Dickinson BC, Janga SC. Krohannon A, et al. Among authors: srivastava r, srivastava m. BMC Genomics. 2022 Mar 2;23(1):172. doi: 10.1186/s12864-022-08366-2. BMC Genomics. 2022. PMID: 35236300 Free PMC article.

9

Prediction and Validation of Transcription Factors Modulating the Expression of Sestrin3 Gene Using an Integrated Computational and Experimental Approach.

Srivastava R, Zhang Y, Xiong X, Zhang X, Pan X, Dong XC, Liangpunsakul S, Janga SC. Srivastava R, et al. PLoS One. 2016 Jul 28;11(7):e0160228. doi: 10.1371/journal.pone.0160228. eCollection 2016. PLoS One. 2016. PMID: 27466818 Free PMC article.

10

Express: A database of transcriptome profiles encompassing known and novel transcripts across multiple development stages in eye tissues.

Budak G, Dash S, Srivastava R, Lachke SA, Janga SC. Budak G, et al. Among authors: srivastava r. Exp Eye Res. 2018 Mar;168:57-68. doi: 10.1016/j.exer.2018.01.009. Epub 2018 Jan 11. Exp Eye Res. 2018. PMID: 29337142 Free PMC article.

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