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Simplified Cas13-based assays for the fast identification of SARS-CoV-2 and its variants.
Arizti-Sanz J, Bradley A, Zhang YB, Boehm CK, Freije CA, Grunberg ME, Kosoko-Thoroddsen TF, Welch NL, Pillai PP, Mantena S, Kim G, Uwanibe JN, John OG, Eromon PE, Kocher G, Gross R, Lee JS, Hensley LE, MacInnis BL, Johnson J, Springer M, Happi CT, Sabeti PC, Myhrvold C. Arizti-Sanz J, et al. Among authors: springer m. Nat Biomed Eng. 2022 Aug;6(8):932-943. doi: 10.1038/s41551-022-00889-z. Epub 2022 May 30. Nat Biomed Eng. 2022. PMID: 35637389 Free PMC article.
An enhanced isothermal amplification assay for viral detection.
Qian J, Boswell SA, Chidley C, Lu ZX, Pettit ME, Gaudio BL, Fajnzylber JM, Ingram RT, Ward RH, Li JZ, Springer M. Qian J, et al. Among authors: springer m. Nat Commun. 2020 Nov 20;11(1):5920. doi: 10.1038/s41467-020-19258-y. Nat Commun. 2020. PMID: 33219228 Free PMC article.
Multiplexed CRISPR-based microfluidic platform for clinical testing of respiratory viruses and identification of SARS-CoV-2 variants.
Welch NL, Zhu M, Hua C, Weller J, Mirhashemi ME, Nguyen TG, Mantena S, Bauer MR, Shaw BM, Ackerman CM, Thakku SG, Tse MW, Kehe J, Uwera MM, Eversley JS, Bielwaski DA, McGrath G, Braidt J, Johnson J, Cerrato F, Moreno GK, Krasilnikova LA, Petros BA, Gionet GL, King E, Huard RC, Jalbert SK, Cleary ML, Fitzgerald NA, Gabriel SB, Gallagher GR, Smole SC, Madoff LC, Brown CM, Keller MW, Wilson MM, Kirby MK, Barnes JR, Park DJ, Siddle KJ, Happi CT, Hung DT, Springer M, MacInnis BL, Lemieux JE, Rosenberg E, Branda JA, Blainey PC, Sabeti PC, Myhrvold C. Welch NL, et al. Among authors: springer m. Nat Med. 2022 May;28(5):1083-1094. doi: 10.1038/s41591-022-01734-1. Epub 2022 Feb 7. Nat Med. 2022. PMID: 35130561 Free PMC article.
Early Introduction and Rise of the Omicron Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) Variant in Highly Vaccinated University Populations.
Petros BA, Turcinovic J, Welch NL, White LF, Kolaczyk ED, Bauer MR, Cleary M, Dobbins ST, Doucette-Stamm L, Gore M, Nair P, Nguyen TG, Rose S, Taylor BP, Tsang D, Wendlandt E, Hope M, Platt JT, Jacobson KR, Bouton T, Yune S, Auclair JR, Landaverde L, Klapperich CM, Hamer DH, Hanage WP, MacInnis BL, Sabeti PC, Connor JH, Springer M. Petros BA, et al. Among authors: springer m. Clin Infect Dis. 2023 Feb 8;76(3):e400-e408. doi: 10.1093/cid/ciac413. Clin Infect Dis. 2023. PMID: 35616119 Free PMC article.
Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) Household Transmission during the Omicron Era in Massachusetts: A Prospective, Case-Ascertained Study using Genomic Epidemiology.
Banga J, Brock-Fisher T, Petros BA, Dai EY, Leonelli AT, Dobbins ST, Messer KS, Nathanson AB, Capone A, Littlehale N, Appiah-Danquah V, Dim S, Moreno GK, Crowther M, Lee KA, DeRuff KC, MacInnis BL, Springer M, Sabeti PC, Stephenson KE. Banga J, et al. Among authors: springer m. medRxiv [Preprint]. 2024 Feb 7:2024.02.05.24302348. doi: 10.1101/2024.02.05.24302348. medRxiv. 2024. PMID: 38370621 Free PMC article. Preprint.
Accessioning and automation compatible anterior nares swab design.
Pettit ME, Boswell SA, Qian J, Novak R, Springer M. Pettit ME, et al. Among authors: springer m. J Virol Methods. 2021 Aug;294:114153. doi: 10.1016/j.jviromet.2021.114153. Epub 2021 May 10. J Virol Methods. 2021. PMID: 33984398 Free PMC article.
Amplicon residues in research laboratories masquerade as COVID-19 in surveillance tests.
Davidi D, Fitzgerald S, Glaspell HL, Jalbert S, Klapperich CM, Landaverde L, Maheras S, Mattoon SE, Britto VM, Nguyen GT, Platt JT, Kuhfeldt K, Landsberg H, Stuopis CW, Turse JE, Hamer DH, Springer M. Davidi D, et al. Among authors: springer m. Cell Rep Methods. 2021 May 24;1(1):100005. doi: 10.1016/j.crmeth.2021.100005. Epub 2021 Apr 2. Cell Rep Methods. 2021. PMID: 34235497 Free PMC article.
723 results